RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 C9orf50Q5SZB4 431 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 ZGPATQ8N5A5 531 aaKnown RBP14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 ZNF384Q8TF68 577 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 SIPA1L1O43166 1804 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 MROH7-TTC4A0A0A0MT08 1334 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 PDS5AQ29RF7 1337 aaKnown RBP14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 IGHA2P01877 340 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 RGS2P41220 211 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 RTP1P59025 263 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 SLF2Q8IX21 1173 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 APBA2Q99767 749 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 PORCNQ9H237 461 aa14.16□□□□□ -0.14
SUPT16H-202ENST00000552829 BDP1A6H8Y1 2624 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 CIAO1O76071 339 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 BACE1P56817 501 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 ERVK-9P63128 1117 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 ERVK-24P63145 666 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 GPR142Q7Z601 462 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 CEP126Q9P2H0 1117 aa14.15□□□□□ -0.14
SUPT16H-202ENST00000552829 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 ADORA1P30542 326 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 JAG1P78504 1218 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 MAP2K5Q13163 448 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 MTMR2Q13614 643 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 RASGRF1Q13972 1273 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 TJAP1Q5JTD0 557 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 PLEKHH3Q7Z736 793 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 LPAR1Q92633 364 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 FLRT1Q9NZU1 646 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 RAPGEFL1Q9UHV5 662 aa14.14□□□□□ -0.15
SUPT16H-202ENST00000552829 C19orf81C9J6K1 198 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 TNFRSF10AO00220 468 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 DNM1LO00429 736 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 FOSL2P15408 326 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 MECOMQ03112 1051 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 SNX17Q15036 470 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 SPTY2D1Q68D10 685 aaPredicted RBP14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 GTF3C2Q8WUA4 911 aaPredicted RBP14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 DDX20Q9UHI6 824 aaKnown RBP14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 HERC5Q9UII4 1024 aaKnown RBP14.13□□□□□ -0.15
SUPT16H-202ENST00000552829 MSCO60682 206 aa14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 HOXC6P09630 235 aa14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 METTL16Q86W50 562 aaKnown RBP14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 MRPL50Q8N5N7 158 aaKnown RBP14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 TRPV1Q8NER1 839 aa14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 ABCF2Q9UG63 623 aa14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 PRKAG2Q9UGJ0 569 aa14.12□□□□□ -0.15
SUPT16H-202ENST00000552829 CNMDO75829 334 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 ASNSP08243 561 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 MFSD14CQ5VZR4 134 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 BADQ92934 168 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 CDK5RAP2Q96SN8 1893 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 TMOD4Q9NZQ9 345 aa14.11□□□□□ -0.15
SUPT16H-202ENST00000552829 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 SLC15A5A6NIM6 579 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 PLA2G5P39877 138 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 IL15P40933 162 aaPredicted RBP14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 ERICH6Q7L0X2 663 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 SIL1Q9H173 461 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 PDLIM7Q9NR12 457 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 GINM1Q9NU53 330 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 ATP11BQ9Y2G3 1177 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 PTPRCP08575 1304 aa14.1□□□□□ -0.15
SUPT16H-202ENST00000552829 TRIM43BA6NCK2 446 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 USP17L10C9JJH3 530 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 LDHCP07864 332 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 PTPREP23469 700 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 TIMM10P62072 90 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 C1orf53Q5VUE5 145 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 SH3RF1Q7Z6J0 888 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 TRIM43Q96BQ3 446 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 NSUN4Q96CB9 384 aaKnown RBP14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 PAGR1Q9BTK6 254 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 CHD9Q3L8U1 2897 aa14.09□□□□□ -0.15
SUPT16H-202ENST00000552829 FOCADQ5VW36 1801 aa14.08□□□□□ -0.15
SUPT16H-202ENST00000552829 CYBAP13498 195 aa14.08□□□□□ -0.16
SUPT16H-202ENST00000552829 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
SUPT16H-202ENST00000552829 GJC2Q5T442 439 aaPredicted RBP14.08□□□□□ -0.16
SUPT16H-202ENST00000552829 CCAR1Q8IX12 1150 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-202ENST00000552829 ARRDC4Q8NCT1 418 aa14.08□□□□□ -0.16
SUPT16H-202ENST00000552829 NPLOC4Q8TAT6 608 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms