RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 BTBD11A6QL63 1104 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 F11P03951 625 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 ZSCAN22P10073 491 aaPredicted RBP7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 EIF2S2P20042 333 aaKnown RBP7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 DAB2P98082 770 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 ORC1Q13415 861 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 GLIPR1L2Q4G1C9 344 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 KSR2Q6VAB6 950 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 ZNF438Q7Z4V0 828 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 CMTR1Q8N1G2 835 aaKnown RBP7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 PI4KAP1Q8N8J0 262 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 SNX29Q8TEQ0 813 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 UBE2Q2Q8WVN8 375 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 EVI5LQ96CN4 794 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 CEP63Q96MT8 703 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 CRISPLD1Q9H336 500 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 DIAPH3Q9NSV4 1193 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 ECHDC1Q9NTX5 307 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 HYPKQ9NX55 129 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 ZKSCAN5Q9Y2L8 839 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 DYRK1BQ9Y463 629 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 A6NHS1 94 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 EIF1AYO14602 144 aaKnown RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 RNMTO43148 476 aaKnown RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 CPNE3O75131 537 aaKnown RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 DDX58O95786 925 aaKnown RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 NBPF7P0C2Y1 421 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 GNA15P30679 374 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 UBE2HP62256 183 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 OS9Q13438 667 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 HSP90AA2PQ14568 343 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.12□□□□□ -1.272e-13■■■□□ 15.3
CHMP4A-210ENST00000552620 EFHC2Q5JST6 749 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 CCDC183Q5T5S1 534 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 TRIM46Q7Z4K8 759 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 NLRP8Q86W28 1048 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 ZFP42Q96MM3 310 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 ALDH8A1Q9H2A2 487 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 LGR6Q9HBX8 967 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 GPAMQ9HCL2 828 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 C9orf78Q9NZ63 289 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 VTI1BQ9UEU0 232 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 SMC3Q9UQE7 1217 aa7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 RGPD8O14715 1765 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 MED1Q15648 1581 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-210ENST00000552620 UTYO14607 1347 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 STX6O43752 255 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 ZKSCAN1P17029 563 aaPredicted RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 SYT1P21579 422 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 PSMA5P28066 241 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 AK2P54819 239 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 TYRO3Q06418 890 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 G3BP1Q13283 466 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 ZNF530Q6P9A1 599 aaPredicted RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 ANKLE2Q86XL3 938 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 LINS1Q8NG48 757 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 KLRG1Q96E93 195 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 MAP7D2Q96T17 732 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 UPF3BQ9BZI7 483 aaKnown RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 C11orf16Q9NQ32 467 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 PDRG1Q9NUG6 133 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 NSFL1CQ9UNZ2 370 aaKnown RBP7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 LMTK3Q96Q04 1460 aa7.11□□□□□ -1.27
CHMP4A-210ENST00000552620 MARF1Q9Y4F3 1742 aaKnown RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 ADCY9O60503 1353 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 RPAP1Q9BWH6 1393 aaPredicted RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 HEG1Q9ULI3 1381 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 MAN1A2O60476 641 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 TNFRSF21O75509 655 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 F13A1P00488 732 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 TPM3P06753 285 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 LBRQ14739 615 aaKnown RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 NECTIN1Q15223 517 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 ANKRD1Q15327 319 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 SAMD5Q5TGI4 173 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 CWC27Q6UX04 472 aaKnown RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 RUFY3Q7L099 469 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 ARHGEF25Q86VW2 580 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 FAM161BQ96MY7 647 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 GAS2L1Q99501 681 aaPredicted RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 RUBCNLQ9H714 662 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 ATP13A2Q9NQ11 1180 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms