RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 ZNF76P36508 570 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 MPP2Q14168 576 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 WFDC3Q8IUB2 231 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 MRPL41Q8IXM3 137 aaKnown RBP8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 XAGE3Q8WTP9 111 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 TMEM87BQ96K49 555 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
RAB3IP-217ENST00000552610 GREM1O60565 184 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 CEACAM5P06731 702 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 CRKP46108 304 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 PDE4BQ07343 736 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 NETO1Q8TDF5 533 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 MRRFQ96E11 262 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 KIAA1522Q9P206 1035 aaPredicted RBP8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-217ENST00000552610 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 WNT11O96014 354 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 PLCG1P19174 1290 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 ITIH2P19823 946 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 VSIG10LQ86VR7 867 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 MCATQ8IVS2 390 aaKnown RBP8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 ZNF296Q8WUU4 475 aaPredicted RBP8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 MKNK2Q9HBH9 465 aa8.11□□□□□ -1.11
RAB3IP-217ENST00000552610 IGF2BP3O00425 579 aaKnown RBP eCLIP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 DIEXFQ68CQ4 756 aaKnown RBP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 SLC6A19Q695T7 634 aa8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 PRDM5Q9NQX1 630 aaPredicted RBP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 METTL5Q9NRN9 209 aaKnown RBP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 OAS3Q9Y6K5 1087 aaKnown RBP8.1□□□□□ -1.11
RAB3IP-217ENST00000552610 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 DNAJA2O60884 412 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 HTR3BO95264 441 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 ARHGAP27Q6ZUM4 889 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 BCL7CQ8WUZ0 217 aaPredicted RBP8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 MAPK8IP1Q9UQF2 711 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 PCDHGB7Q9Y5F8 929 aa8.09□□□□□ -1.11
RAB3IP-217ENST00000552610 PRR33A8MZF0 331 aa8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 FAM13CQ8NE31 585 aa8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 BRMS1Q9HCU9 246 aa8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 TPX2Q9ULW0 747 aaKnown RBP8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
RAB3IP-217ENST00000552610 BNIP3Q12983 259 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 NKPD1Q17RQ9 610 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 CWF19L2Q2TBE0 894 aaKnown RBP8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 CDH24Q86UP0 819 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 USP48Q86UV5 1035 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 FLCNQ8NFG4 579 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 DNAJB8Q8NHS0 232 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 RNF34Q969K3 372 aa8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 PAK6Q9NQU5 681 aaPredicted RBP8.07□□□□□ -1.12
RAB3IP-217ENST00000552610 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 SCAMP3O14828 347 aaKnown RBP8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 CD96P40200 585 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 SFRP5Q5T4F7 317 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 METTL16Q86W50 562 aaKnown RBP8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 PPP1R13LQ8WUF5 828 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 PCDHB14Q9Y5E9 798 aa8.06□□□□□ -1.12
RAB3IP-217ENST00000552610 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 ZNF865P0CJ78 1059 aaPredicted RBP8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 C22orf34Q6ZV56 151 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 ABI1Q8IZP0 508 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 CYB5D2Q8WUJ1 264 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 SPON2Q9BUD6 331 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 NT5C1AQ9BXI3 368 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 SLC5A6Q9Y289 635 aa8.05□□□□□ -1.12
RAB3IP-217ENST00000552610 TMEM265A0A087WTH1 108 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 CD8BP10966 210 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 HDLBPQ00341 1268 aaKnown RBP8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 PRKCQQ04759 706 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 AOC3Q16853 763 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 SEZ6Q53EL9 994 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
RAB3IP-217ENST00000552610 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms