RNA–Protein interactions for RNA: ENST00000551861.1

ITGA5-208, Transcript of integrin subunit alpha 5, human

TSL 4

Gene ITGA5, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGA5-208	ENST00000551861	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.48	□□□□□ -0.25
ITGA5-208	ENST00000551861	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
ITGA5-208	ENST00000551861	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.48	□□□□□ -0.25
ITGA5-208	ENST00000551861	HMX1	Q9NP08	348 aa	Predicted RBP	13.48	□□□□□ -0.25
ITGA5-208	ENST00000551861	NOP58	Q9Y2X3	529 aa	Known RBP	13.48	□□□□□ -0.25
ITGA5-208	ENST00000551861	GDF11	O95390	407 aa		13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	HOXA7	P31268	230 aa	Predicted RBP	13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	TMED8	Q6PL24	325 aa	Predicted RBP	13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	NECAB2	Q7Z6G3	386 aa		13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	UBE2Q1	Q7Z7E8	422 aa		13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	NUDT12	Q9BQG2	462 aa		13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	PAK6	Q9NQU5	681 aa	Predicted RBP	13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	SAP30BP	Q9UHR5	308 aa	Known RBP	13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	ATAD5	Q96QE3	1844 aa		13.47	□□□□□ -0.25
ITGA5-208	ENST00000551861	RPTOR	Q8N122	1335 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	MAST2	Q6P0Q8	1798 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	ZBTB7B	O15156	539 aa	Predicted RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	RRP1B	Q14684	758 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	HSP90AB4P	Q58FF6	505 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	USP17L2	Q6R6M4	530 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	ADGRA1	Q86SQ6	560 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	TTC6	Q86TZ1	520 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	TRMT44	Q8IYL2	757 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	ANKLE1	Q8NAG6	615 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	SOCS4	Q8WXH5	440 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	P2RX7	Q99572	595 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	FEZ1	Q99689	392 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	PIH1D3	Q9NQM4	214 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	RBM27	Q9P2N5	1060 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	MORF4L1	Q9UBU8	362 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	DBNL	Q9UJU6	430 aa	Known RBP	13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	ZBTB21	Q9ULJ3	1066 aa		13.46	□□□□□ -0.25
ITGA5-208	ENST00000551861	LOC285556	D6RIA3	1793 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	MS4A1	P11836	297 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	CYP2B6	P20813	491 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	MAPK4	P31152	587 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	HERVK_113	P62684	666 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	DYNLL1	P63167	89 aa	Known RBP	13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	METTL16	Q86W50	562 aa	Known RBP	13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	MAGEB6	Q8N7X4	407 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	MIGA1	Q8NAN2	632 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	PAWR	Q96IZ0	340 aa	Known RBP	13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	CRISPLD2	Q9H0B8	497 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	CABP5	Q9NP86	173 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	SERPINB13	Q9UIV8	391 aa		13.45	□□□□□ -0.26
ITGA5-208	ENST00000551861	GLRX3	O76003	335 aa	Known RBP	13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP14	P54578	494 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	CCNA1	P78396	465 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	RAB3GAP1	Q15042	981 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	TTF1	Q15361	905 aa	Predicted RBP	13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	AACS	Q86V21	672 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	EAF2	Q96CJ1	260 aa	Predicted RBP	13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	PAGR1	Q9BTK6	254 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	NBPF3	Q9H094	633 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	DNAJC18	Q9H819	358 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861	GJD2	Q9UKL4	321 aa		13.44	□□□□□ -0.26
ITGA5-208	ENST00000551861		A0A1W2PPC1	479 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	GH2	P01242	217 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	XRCC5	P13010	732 aa	Known RBP	13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	ZKSCAN1	P17029	563 aa	Predicted RBP	13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	RGS2	P41220	211 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	ERVK-9	P63128	1117 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	ERVK-24	P63145	666 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	CERKL	Q49MI3	558 aa	Predicted RBP	13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	TLR7	Q9NYK1	1049 aa	Known RBP	13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	EXOC6B	Q9Y2D4	811 aa		13.43	□□□□□ -0.26
ITGA5-208	ENST00000551861	TRIOBP	Q9H2D6	2365 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L15	C9J2P7	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L13	C9JLJ4	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L11	C9JVI0	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L18	D6R9N7	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L22	D6RA61	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L17	D6RBQ6	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L19	D6RCP7	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L20	D6RJB6	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	POLR3D	P05423	398 aa	Predicted RBP	13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	USP17L24	Q0WX57	530 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	ZYX	Q15942	572 aa	Known RBP	13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	ABCB5	Q2M3G0	1257 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	WDR78	Q5VTH9	848 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	TATDN1	Q6P1N9	297 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	CEP85	Q6P2H3	762 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	PLEKHH3	Q7Z736	793 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	CLASRP	Q8N2M8	674 aa	Known RBP	13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	EHD4	Q9H223	541 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	DOCK3	Q8IZD9	2030 aa		13.42	□□□□□ -0.26
ITGA5-208	ENST00000551861	MAGEB6P1	A0A0J9YX57	407 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	HMMR	O75330	724 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	PRKAR2A	P13861	404 aa	Known RBP	13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	JAG1	P78504	1218 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	GPR142	Q7Z601	462 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	TRIB2	Q92519	343 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	BCL11A	Q9H165	835 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	C11orf49	Q9H6J7	331 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	TXNRD2	Q9NNW7	524 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	EMILIN3	Q9NT22	766 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	RBPJL	Q9UBG7	517 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	NDUFB9	Q9Y6M9	179 aa		13.41	□□□□□ -0.26
ITGA5-208	ENST00000551861	IFIT2	P09913	472 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms