RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	PEX10	O60683	326 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	MAPK4	P31152	587 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	CACNB2	Q08289	660 aa	Predicted RBP	13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	MTX1	Q13505	466 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	PDE3A	Q14432	1141 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	GORAB	Q5T7V8	394 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	CDCA7L	Q96GN5	454 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	DNAJC18	Q9H819	358 aa		13.1	□□□□□ -0.31
PFKM-223	ENST00000551485	MAST2	Q6P0Q8	1798 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	C19orf81	C9J6K1	198 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	GNAI3	P08754	354 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	CT47B1	P0C2W7	299 aa	Predicted RBP	13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	MCAM	P43121	646 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	ERVK-9	P63128	1117 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	ERVK-24	P63145	666 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	JAG1	P78504	1218 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	PPP4R3CP	Q6ZMV5	832 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	USP6NL	Q92738	828 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	NOL10	Q9BSC4	688 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	LRP2BP	Q9P2M1	347 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	RBPJL	Q9UBG7	517 aa		13.09	□□□□□ -0.31
PFKM-223	ENST00000551485	CDK5RAP2	Q96SN8	1893 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	USP17L10	C9JJH3	530 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	BAG3	O95817	575 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	UQCRFS1P1	P0C7P4	283 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	PLCG2	P16885	1265 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	CCND3	P30281	292 aa	Predicted RBP	13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	RGS2	P41220	211 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	CCL14	Q16627	93 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	LRRC26	Q2I0M4	334 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.08	□□□□□ -0.32
PFKM-223	ENST00000551485		Q3C1V9	767 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	MORN1	Q5T089	497 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	LHX8	Q68G74	356 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	GPR142	Q7Z601	462 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	METTL16	Q86W50	562 aa	Known RBP	13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	MAPKAPK5	Q8IW41	473 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	TRMT2A	Q8IZ69	625 aa	Known RBP	13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	APBA2	Q99767	749 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	PORCN	Q9H237	461 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	GINM1	Q9NU53	330 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	ZBTB21	Q9ULJ3	1066 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	FRMPD3	Q5JV73	1810 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	FOCAD	Q5VW36	1801 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	FLT1	P17948	1338 aa		13.08	□□□□□ -0.32
PFKM-223	ENST00000551485	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	GDF11	O95390	407 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	MDM2	Q00987	491 aa	Predicted RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	NAA16	Q6N069	864 aa	Predicted RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	POTEE	Q6S8J3	1075 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	PLEKHH3	Q7Z736	793 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	CCAR1	Q8IX12	1150 aa	Known RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	TGFBRAP1	Q8WUH2	860 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	PAGR1	Q9BTK6	254 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	TRIM34	Q9BYJ4	488 aa		13.07	□□□□□ -0.32
PFKM-223	ENST00000551485	PPP4C	P60510	307 aa		13.06	□□□□□ -0.32
PFKM-223	ENST00000551485	EMILIN3	Q9NT22	766 aa		13.06	□□□□□ -0.32
PFKM-223	ENST00000551485	MAP2K5	Q13163	448 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	USP17L2	Q6R6M4	530 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	ADGRA1	Q86SQ6	560 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	ARHGAP45	Q92619	1136 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	CWC22	Q9HCG8	908 aa	Known RBP	13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	SNRK	Q9NRH2	765 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	PALD1	Q9ULE6	856 aa		13.05	□□□□□ -0.32
PFKM-223	ENST00000551485	PNMA6E	A0A0J9YXQ4	647 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	POTEB2	H3BUK9	544 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	HLA-DOA	P06340	250 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	RARS	P54136	660 aa	Known RBP	13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	MFSD14C	Q5VZR4	134 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	C12orf42	Q96LP6	360 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	GUCD1	Q96NT3	240 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	SAP30BP	Q9UHR5	308 aa	Known RBP	13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	RABGAP1	Q9Y3P9	1069 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	VCAN	P13611	3396 aa		13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.04	□□□□□ -0.32
PFKM-223	ENST00000551485	EYS	Q5T1H1	3165 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	CNMD	O75829	334 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	GLRX3	O76003	335 aa	Known RBP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	GH2	P01242	217 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	GNAI2	P04899	355 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	CCNA1	P78396	465 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	TTC39A	Q5SRH9	613 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	ATF7IP	Q6VMQ6	1270 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	EDC3	Q96F86	508 aa	Known RBP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	FEZ1	Q99689	392 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	FLRT1	Q9NZU1	646 aa		13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	DDX20	Q9UHI6	824 aa	Known RBP	13.03	□□□□□ -0.32
PFKM-223	ENST00000551485	MYH1	P12882	1939 aa		13.02	□□□□□ -0.32
PFKM-223	ENST00000551485	SLC15A5	A6NIM6	579 aa		13.02	□□□□□ -0.33
PFKM-223	ENST00000551485	USP17L15	C9J2P7	530 aa		13.02	□□□□□ -0.33

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