RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 BACE1P56817 501 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 IRX3P78415 501 aaPredicted RBP24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 MTMR2Q13614 643 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 ANKRD13CQ8N6S4 541 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 DNAJC18Q9H819 358 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 PAG1Q9NWQ8 432 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 ZBTB21Q9ULJ3 1066 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 MYH1P12882 1939 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 RBBP6Q7Z6E9 1792 aaKnown RBP24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 ZSWIM8A7E2V4 1837 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 USP17L10C9JJH3 530 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 MYCP01106 439 aaPredicted RBP24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 POLR3DP05423 398 aaPredicted RBP24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 CTGFP29279 349 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 PRPF38BQ5VTL8 546 aaKnown RBP24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 COA7Q96BR5 231 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 BOLA2Q9H3K6 86 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 ZNF532Q9HCE3 1301 aa24.57■■□□□ 1.52
SLC48A1-208ENST00000551301 EN2P19622 333 aaPredicted RBP24.56■■□□□ 1.52
SLC48A1-208ENST00000551301 UBXN2AP68543 259 aa24.56■■□□□ 1.52
SLC48A1-208ENST00000551301 FAM110CQ1W6H9 321 aa24.56■■□□□ 1.52
SLC48A1-208ENST00000551301 RIOK1Q9BRS2 568 aaKnown RBP24.56■■□□□ 1.52
SLC48A1-208ENST00000551301 SIPA1L1O43166 1804 aa24.56■■□□□ 1.52
SLC48A1-208ENST00000551301 PRKCZQ05513 592 aa24.55■■□□□ 1.52
SLC48A1-208ENST00000551301 SLAIN1Q8ND83 568 aa24.55■■□□□ 1.52
SLC48A1-208ENST00000551301 GPATCH3Q96I76 525 aa24.55■■□□□ 1.52
SLC48A1-208ENST00000551301 ASCC2Q9H1I8 757 aaPredicted RBP24.55■■□□□ 1.52
SLC48A1-208ENST00000551301 CABP5Q9NP86 173 aa24.55■■□□□ 1.52
SLC48A1-208ENST00000551301 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 GH2P01242 217 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 CERKLQ49MI3 558 aaPredicted RBP24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 ZSCAN25Q6NSZ9 544 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 TATDN1Q6P1N9 297 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 FEZ1Q99689 392 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 HAUS7Q99871 368 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 MCM9Q9NXL9 1143 aa24.54■■□□□ 1.52
SLC48A1-208ENST00000551301 MGAMO43451 1857 aa24.53■■□□□ 1.52
SLC48A1-208ENST00000551301 AMOTL1Q8IY63 956 aa24.53■■□□□ 1.52
SLC48A1-208ENST00000551301 NKX2-3Q8TAU0 364 aa24.53■■□□□ 1.52
SLC48A1-208ENST00000551301 DDRGK1Q96HY6 314 aa24.53■■□□□ 1.52
SLC48A1-208ENST00000551301 ABCB5Q2M3G0 1257 aa24.52■■□□□ 1.52
SLC48A1-208ENST00000551301 USP17L2Q6R6M4 530 aa24.52■■□□□ 1.52
SLC48A1-208ENST00000551301 CENPFP49454 3210 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 ADCY3O60266 1144 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 HOXA7P31268 230 aaPredicted RBP24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 FLT3LGP49771 235 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 JAG1P78504 1218 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 RAB3GAP1Q15042 981 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 GTF3C2Q8WUA4 911 aaPredicted RBP24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 EDC3Q96F86 508 aaKnown RBP24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 TAOK2Q9UL54 1235 aa24.51■■□□□ 1.51
SLC48A1-208ENST00000551301 TCRBV5S4A2TA0A5A2 114 aa24.5■■□□□ 1.51
SLC48A1-208ENST00000551301 USP14P54578 494 aa24.5■■□□□ 1.51
SLC48A1-208ENST00000551301 IRF5Q13568 498 aa24.5■■□□□ 1.51
SLC48A1-208ENST00000551301 ECHDC1Q9NTX5 307 aa24.5■■□□□ 1.51
SLC48A1-208ENST00000551301 GABRQQ9UN88 632 aa24.5■■□□□ 1.51
SLC48A1-208ENST00000551301 SMARCA5O60264 1052 aaPredicted RBP24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 ADD2P35612 726 aa24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 CCAR1Q8IX12 1150 aaKnown RBP24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 LCORLQ8N3X6 602 aa24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 PXYLP1Q8TE99 480 aa24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 DCTPP1Q9H773 170 aa24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 ATP8A2Q9NTI2 1148 aa24.49■■□□□ 1.51
SLC48A1-208ENST00000551301 MBD4O95243 580 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 CCL5P13501 91 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 PLCD1P51178 756 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 UBE3CQ15386 1083 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 RNF208Q9H0X6 261 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 ARMT1Q9H993 441 aa24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 DCP1AQ9NPI6 582 aaPredicted RBP24.48■■□□□ 1.51
SLC48A1-208ENST00000551301 NAV1Q8NEY1 1877 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 HERVK_113P62684 666 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 MTFR1Q15390 333 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 SHROOM1Q2M3G4 852 aaPredicted RBP24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 GPRC5AQ8NFJ5 357 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 SDR42E1Q8WUS8 393 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 P2RX7Q99572 595 aaKnown RBP24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 MORF4L1Q9UBU8 362 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 SWAP70Q9UH65 585 aa24.47■■□□□ 1.51
SLC48A1-208ENST00000551301 MPHOSPH10O00566 681 aaKnown RBP24.46■■□□□ 1.51
SLC48A1-208ENST00000551301 GJB1P08034 283 aa24.46■■□□□ 1.51
SLC48A1-208ENST00000551301 SHMT1P34896 483 aa24.46■■□□□ 1.51
SLC48A1-208ENST00000551301 KIAA1683Q9H0B3 1180 aa24.46■■□□□ 1.51
SLC48A1-208ENST00000551301 EMILIN3Q9NT22 766 aa24.46■■□□□ 1.51
SLC48A1-208ENST00000551301 USP17L15C9J2P7 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L13C9JLJ4 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L11C9JVI0 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L18D6R9N7 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L22D6RA61 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L17D6RBQ6 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L19D6RCP7 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L20D6RJB6 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 USP17L24Q0WX57 530 aa24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 ZYXQ15942 572 aaKnown RBP24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 ZBTB47Q9UFB7 747 aaPredicted RBP24.45■■□□□ 1.5
SLC48A1-208ENST00000551301 ELNP15502 786 aa24.44■■□□□ 1.5
SLC48A1-208ENST00000551301 CAPN2P17655 700 aa24.44■■□□□ 1.5
SLC48A1-208ENST00000551301 LRRFIP1Q32MZ4 808 aaKnown RBP24.44■■□□□ 1.5
SLC48A1-208ENST00000551301 C12orf42Q96LP6 360 aa24.44■■□□□ 1.5
SLC48A1-208ENST00000551301 CWC22Q9HCG8 908 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms