RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DYNLL1P63167 89 aaKnown RBP26.52■■□□□ 1.84
SMARCC2-210ENST00000550519 SHROOM1Q2M3G4 852 aaPredicted RBP26.52■■□□□ 1.84
SMARCC2-210ENST00000550519 CRISPLD2Q9H0B8 497 aa26.52■■□□□ 1.84
SMARCC2-210ENST00000550519 C19orf81C9J6K1 198 aa26.51■■□□□ 1.83
SMARCC2-210ENST00000550519 TFRCP02786 760 aaKnown RBP26.51■■□□□ 1.83
SMARCC2-210ENST00000550519 CYP7A1P22680 504 aa26.51■■□□□ 1.83
SMARCC2-210ENST00000550519 TMOD4Q9NZQ9 345 aa26.51■■□□□ 1.83
SMARCC2-210ENST00000550519 GDF11O95390 407 aa26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 IRX3P78415 501 aaPredicted RBP26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 CEP85Q6P2H3 762 aa26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 P2RX7Q99572 595 aaKnown RBP26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 TRIM34Q9BYJ4 488 aa26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 SAP30BPQ9UHR5 308 aaKnown RBP26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 ZBTB21Q9ULJ3 1066 aa26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 NR2E3Q9Y5X4 410 aa26.5■■□□□ 1.83
SMARCC2-210ENST00000550519 USP17L10C9JJH3 530 aa26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 IDH1O75874 414 aaKnown RBP26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 HMGCRP04035 888 aa26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 HLA-DOAP06340 250 aa26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 RBM27Q9P2N5 1060 aaKnown RBP26.49■■□□□ 1.83
SMARCC2-210ENST00000550519 RANBP2P49792 3224 aaKnown RBP26.48■■□□□ 1.83
SMARCC2-210ENST00000550519 CERS3Q8IU89 383 aa26.48■■□□□ 1.83
SMARCC2-210ENST00000550519 PRO3102Q9H379 93 aa26.48■■□□□ 1.83
SMARCC2-210ENST00000550519 CDK5RAP2Q96SN8 1893 aa26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 FOCADQ5VW36 1801 aa26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 HERVK_113P62684 666 aa26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 MIGA1Q8NAN2 632 aa26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 TXNRD2Q9NNW7 524 aa26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 MYO5AQ9Y4I1 1855 aaKnown RBP26.47■■□□□ 1.83
SMARCC2-210ENST00000550519 TMED8Q6PL24 325 aaPredicted RBP26.46■■□□□ 1.83
SMARCC2-210ENST00000550519 MAGEB6Q8N7X4 407 aa26.46■■□□□ 1.83
SMARCC2-210ENST00000550519 GPRC5AQ8NFJ5 357 aa26.46■■□□□ 1.83
SMARCC2-210ENST00000550519 ANTXR1Q9H6X2 564 aa26.46■■□□□ 1.83
SMARCC2-210ENST00000550519 NDUFB9Q9Y6M9 179 aa26.46■■□□□ 1.83
SMARCC2-210ENST00000550519 RPTORQ8N122 1335 aa26.45■■□□□ 1.83
SMARCC2-210ENST00000550519 PEX10O60683 326 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 TATDN1Q6P1N9 297 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 ERC1Q8IUD2 1116 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 MIER1Q8N108 512 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 PAWRQ96IZ0 340 aaKnown RBP26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 EMILIN3Q9NT22 766 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 RBPJLQ9UBG7 517 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 EXOC6BQ9Y2D4 811 aa26.45■■□□□ 1.82
SMARCC2-210ENST00000550519 GH2P01242 217 aa26.44■■□□□ 1.82
SMARCC2-210ENST00000550519 USP5P45974 858 aa26.44■■□□□ 1.82
SMARCC2-210ENST00000550519 TRIM32Q13049 653 aa26.44■■□□□ 1.82
SMARCC2-210ENST00000550519 EHD4Q9H223 541 aa26.44■■□□□ 1.82
SMARCC2-210ENST00000550519 EVI5O60447 810 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 MAP3K12Q12852 859 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 USP17L2Q6R6M4 530 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 AACSQ86V21 672 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 ANKLE1Q8NAG6 615 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 TRIB2Q92519 343 aa26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 HMX1Q9NP08 348 aaPredicted RBP26.43■■□□□ 1.82
SMARCC2-210ENST00000550519 XRCC5P13010 732 aaKnown RBP26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 Q3C1V9 767 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 POTEEQ6S8J3 1075 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 NECAB2Q7Z6G3 386 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 PANK1Q8TE04 598 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 DIS3LQ8TF46 1054 aaKnown RBP26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 GTF3C2Q8WUA4 911 aaPredicted RBP26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 SOCS4Q8WXH5 440 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 NUDT12Q9BQG2 462 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 SERPINB13Q9UIV8 391 aa26.42■■□□□ 1.82
SMARCC2-210ENST00000550519 CYP2B6P20813 491 aa26.41■■□□□ 1.82
SMARCC2-210ENST00000550519 MAPK4P31152 587 aa26.41■■□□□ 1.82
SMARCC2-210ENST00000550519 MAP3K21Q5TCX8 1036 aa26.41■■□□□ 1.82
SMARCC2-210ENST00000550519 C12orf42Q96LP6 360 aa26.41■■□□□ 1.82
SMARCC2-210ENST00000550519 PLXNB2O15031 1838 aa26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 ERVK-9P63128 1117 aa26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 ERVK-24P63145 666 aa26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 TTC6Q86TZ1 520 aa26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 USP6NLQ92738 828 aa26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 RIOK1Q9BRS2 568 aaKnown RBP26.4■■□□□ 1.82
SMARCC2-210ENST00000550519 HSP90AB4PQ58FF6 505 aa26.39■■□□□ 1.82
SMARCC2-210ENST00000550519 PORCNQ9H237 461 aa26.39■■□□□ 1.82
SMARCC2-210ENST00000550519 MNX1P50219 401 aaPredicted RBP26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 CERKLQ49MI3 558 aaPredicted RBP26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 RHPN1Q8TCX5 695 aa26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 PAGR1Q9BTK6 254 aa26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 IL1RAPL2Q9NP60 686 aa26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 ZBED9Q6R2W3 1325 aa26.38■■□□□ 1.81
SMARCC2-210ENST00000550519 SZT2Q5T011 3432 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 MORN1Q5T089 497 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 GPR142Q7Z601 462 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 TRMT44Q8IYL2 757 aaKnown RBP26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 KIAA1683Q9H0B3 1180 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 OGDHLQ9ULD0 1010 aa26.37■■□□□ 1.81
SMARCC2-210ENST00000550519 MYH1P12882 1939 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L15C9J2P7 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L13C9JLJ4 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L11C9JVI0 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L18D6R9N7 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L22D6RA61 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L17D6RBQ6 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L19D6RCP7 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 USP17L20D6RJB6 530 aa26.36■■□□□ 1.81
SMARCC2-210ENST00000550519 PRKAR2AP13861 404 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms