RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
CACNB3-217ENST00000550483 OGFOD1Q8N543 542 aa14.67□□□□□ -0.06
CACNB3-217ENST00000550483 TMOD2Q9NZR1 351 aa14.67□□□□□ -0.06
CACNB3-217ENST00000550483 BRCA1P38398 1863 aaKnown RBP14.67□□□□□ -0.06
CACNB3-217ENST00000550483 FOCADQ5VW36 1801 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 PLIN4Q96Q06 1357 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 WDHD1O75717 1129 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 TNIP1Q15025 636 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 RTN1Q16799 776 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 ATL3Q6DD88 541 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 MICU3Q86XE3 530 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 KIAA0825Q8IV33 1275 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 ZNF654Q8IZM8 581 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 ENAHQ8N8S7 591 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 OSBPL5Q9H0X9 879 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 RBM27Q9P2N5 1060 aaKnown RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
CACNB3-217ENST00000550483 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-217ENST00000550483 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 ENTPD3O75355 529 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 CYP2D6P10635 497 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 IFNAR1P17181 557 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
CACNB3-217ENST00000550483 SCNN1DP51172 638 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 MTMR14Q8NCE2 650 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
CACNB3-217ENST00000550483 GPHNQ9NQX3 736 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-217ENST00000550483 ZNF277Q9NRM2 450 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-217ENST00000550483 ORC3Q9UBD5 711 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-217ENST00000550483 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
CACNB3-217ENST00000550483 JAK2O60674 1132 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 KIF5BP33176 963 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 CDK8P49336 464 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
CACNB3-217ENST00000550483 TFAP4Q01664 338 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 FANCBQ8NB91 859 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 TMEM87AQ8NBN3 555 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 GMLQ99445 158 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
CACNB3-217ENST00000550483 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 SERPINB13Q9UIV8 391 aa14.64□□□□□ -0.07
CACNB3-217ENST00000550483 FER1L6Q2WGJ9 1857 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 PRDM1O75626 825 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 MBD3O95983 291 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
CACNB3-217ENST00000550483 GNAQP50148 359 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 PLCD1P51178 756 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 GABPAQ06546 454 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
CACNB3-217ENST00000550483 CFAP100Q494V2 611 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 CTCFLQ8NI51 663 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-217ENST00000550483 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 RNF26Q9BY78 433 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-217ENST00000550483 KAT14Q9H8E8 782 aa14.63□□□□□ -0.07
CACNB3-217ENST00000550483 SAP30BPQ9UHR5 308 aaKnown RBP14.63□□□□□ -0.07
CACNB3-217ENST00000550483 ATRNL1Q5VV63 1379 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 PSMD14O00487 310 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 MYO1BO43795 1136 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-217ENST00000550483 XBP1P17861 261 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 RASA1P20936 1047 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 KRT85P78386 507 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 AKAP17AQ02040 695 aaKnown RBP14.62□□□□□ -0.07
CACNB3-217ENST00000550483 RASSF7Q02833 373 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 PICALMQ13492 652 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 TRIM29Q14134 588 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-217ENST00000550483 FAM177A1Q8N128 213 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-217ENST00000550483 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 CDK5RAP2Q96SN8 1893 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 LZTS2Q9BRK4 669 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 KCNQ5Q9NR82 932 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
CACNB3-217ENST00000550483 NFKBIEO00221 500 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 TRAK2O60296 914 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 DEXIO95424 95 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 NOVP48745 357 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 TROAPQ12815 778 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 NTRK3Q16288 839 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 KLHL40Q2TBA0 621 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 BRAPQ7Z569 592 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 STK11IPQ8N1F8 1099 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms