RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.89■□□□□ 0.93
CDK4-207ENST00000550419 AFG3L2Q9Y4W6 797 aa20.89■□□□□ 0.93
CDK4-207ENST00000550419 ZHX2Q9Y6X8 837 aa20.89■□□□□ 0.93
CDK4-207ENST00000550419 BAZ2AQ9UIF9 1905 aaKnown RBP20.88■□□□□ 0.93
CDK4-207ENST00000550419 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 CCDC171Q6TFL3 1326 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 ALDH1A1P00352 501 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 CERKLQ49MI3 558 aaPredicted RBP20.88■□□□□ 0.93
CDK4-207ENST00000550419 BMP2KLQ5H9B9 411 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 CFHR5Q9BXR6 569 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 ZBTB21Q9ULJ3 1066 aa20.88■□□□□ 0.93
CDK4-207ENST00000550419 CYP2D7A0A087X1C5 515 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 USP17L5A8MUK1 530 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 EVX2Q03828 476 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 CWC27Q6UX04 472 aaKnown RBP20.87■□□□□ 0.93
CDK4-207ENST00000550419 ZNF589Q86UQ0 364 aaPredicted RBP20.87■□□□□ 0.93
CDK4-207ENST00000550419 IFNL1Q8IU54 200 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 WDR18Q9BV38 432 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 NAPBQ9H115 298 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 ZCCHC17Q9NP64 241 aaKnown RBP20.87■□□□□ 0.93
CDK4-207ENST00000550419 RNF186Q9NXI6 227 aa20.87■□□□□ 0.93
CDK4-207ENST00000550419 CCL15-CCL14A0A0B4J2E2 113 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 CDK8P49336 464 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 JAG1P78504 1218 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 CCL15Q16663 113 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 OTUD7BQ6GQQ9 843 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 BRI3BPQ8WY22 251 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 DYNLL2Q96FJ2 89 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 CCDC17Q96LX7 622 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 AS3MTQ9HBK9 375 aa20.86■□□□□ 0.93
CDK4-207ENST00000550419 ATAD5Q96QE3 1844 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 RAD50Q92878 1312 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 A0A0G2JLL6 359 aaPredicted RBP20.85■□□□□ 0.93
CDK4-207ENST00000550419 FOXN1O15353 648 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
CDK4-207ENST00000550419 CHMLP26374 656 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
CDK4-207ENST00000550419 ABCB5Q2M3G0 1257 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 PRRT2Q7Z6L0 340 aaPredicted RBP20.85■□□□□ 0.93
CDK4-207ENST00000550419 ZNF280CQ8ND82 737 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 RUFY2Q8WXA3 655 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 PTPN18Q99952 460 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 ZNF287Q9HBT7 754 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 CABP5Q9NP86 173 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 PHIPQ8WWQ0 1821 aa20.85■□□□□ 0.93
CDK4-207ENST00000550419 MINDY4BA8MYZ0 360 aa20.84■□□□□ 0.93
CDK4-207ENST00000550419 IGF2BP3O00425 579 aaKnown RBP eCLIP20.84■□□□□ 0.93
CDK4-207ENST00000550419 GDF11O95390 407 aa20.84■□□□□ 0.93
CDK4-207ENST00000550419 GH2P01242 217 aa20.84■□□□□ 0.93
CDK4-207ENST00000550419 IFFO2Q5TF58 517 aa20.84■□□□□ 0.93
CDK4-207ENST00000550419 SMIM22K7EJ46 135 aa20.83■□□□□ 0.93
CDK4-207ENST00000550419 TRPA1O75762 1119 aa20.83■□□□□ 0.93
CDK4-207ENST00000550419 MOGSQ13724 837 aa20.83■□□□□ 0.93
CDK4-207ENST00000550419 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
CDK4-207ENST00000550419 SLC44A5Q8NCS7 719 aa20.83■□□□□ 0.93
CDK4-207ENST00000550419 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.83■□□□□ 0.93
CDK4-207ENST00000550419 ANAPC4Q9UJX5 808 aa20.83■□□□□ 0.93
CDK4-207ENST00000550419 FGAP02671 866 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
CDK4-207ENST00000550419 PPARAQ07869 468 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 SPP2Q13103 211 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 NOM1Q5C9Z4 860 aaKnown RBP20.82■□□□□ 0.92
CDK4-207ENST00000550419 SH3D19Q5HYK7 790 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 TMEM179Q6ZVK1 233 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 ANKRD23Q86SG2 305 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 SKAP1Q86WV1 359 aa20.82■□□□□ 0.92
CDK4-207ENST00000550419 TRIM75PA6NK02 468 aa20.81■□□□□ 0.92
CDK4-207ENST00000550419 HSPA8P11142 646 aaKnown RBP20.81■□□□□ 0.92
CDK4-207ENST00000550419 SHROOM1Q2M3G4 852 aaPredicted RBP20.81■□□□□ 0.92
CDK4-207ENST00000550419 CCDC84Q86UT8 332 aaPredicted RBP20.81■□□□□ 0.92
CDK4-207ENST00000550419 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
CDK4-207ENST00000550419 C19orf81C9J6K1 198 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 BTBD19C9JJ37 291 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 GUCY1A2P33402 732 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 BACE1P56817 501 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 PDE4BQ07343 736 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 FAM43AQ8N2R8 423 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 PROCA1Q8NCQ7 364 aaPredicted RBP20.8■□□□□ 0.92
CDK4-207ENST00000550419 MKNK2Q9HBH9 465 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 SLC45A1Q9Y2W3 748 aa20.8■□□□□ 0.92
CDK4-207ENST00000550419 PTPRFP10586 1907 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 USP17L10C9JJH3 530 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 SGSM2O43147 1006 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 RASA1P20936 1047 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 RAB3GAP1Q15042 981 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
CDK4-207ENST00000550419 MPHOSPH10O00566 681 aaKnown RBP20.78■□□□□ 0.92
CDK4-207ENST00000550419 FGRP09769 529 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 AKR1B1P15121 316 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 SEPT2Q15019 361 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 GPAT2Q6NUI2 795 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 KIAA1683Q9H0B3 1180 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 IL25Q9H293 177 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.78■□□□□ 0.92
CDK4-207ENST00000550419 MYH8P13535 1937 aa20.78■□□□□ 0.92
CDK4-207ENST00000550419 PCP11498 1178 aaKnown RBP20.77■□□□□ 0.92
CDK4-207ENST00000550419 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
CDK4-207ENST00000550419 KANSL2Q9H9L4 492 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms