RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 ZKSCAN3Q9BRR0 538 aa13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 SLKQ9H2G2 1235 aaPredicted RBP13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
CTDSP2-206ENST00000550144 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 EGFRP00533 1210 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 STK3Q13188 491 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 CCDC178Q5BJE1 867 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 CHMP4CQ96CF2 233 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 TNKSO95271 1327 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
CTDSP2-206ENST00000550144 GOLGA8BA8MQT2 603 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 PFKFB2O60825 505 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 EPS15P42566 896 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 SYNE3Q6ZMZ3 975 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 SGMS1Q86VZ5 419 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 GTF3C6Q969F1 213 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 CSRNP1Q96S65 589 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
CTDSP2-206ENST00000550144 SHMT1P34896 483 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 SEC23AQ15436 765 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 IFIT1BQ5T764 474 aaKnown RBP13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 ENAHQ8N8S7 591 aaPredicted RBP13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 SLC12A7Q9Y666 1083 aa13.53□□□□□ -0.24
CTDSP2-206ENST00000550144 ZBTB43O43298 467 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 NMT2O60551 498 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 RASA3Q14644 834 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 APOA5Q6Q788 366 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 DGKHQ86XP1 1220 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 CCDC17Q96LX7 622 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
CTDSP2-206ENST00000550144 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 SCRN1Q12765 414 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 CATIPQ7Z7H3 387 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 IL17RBQ9NRM6 502 aa13.51□□□□□ -0.25
CTDSP2-206ENST00000550144 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 TBC1D12O60347 775 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 AKR1B1P15121 316 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 DDIT3P35638 169 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 METAP2P50579 478 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■□□□□ 8.6
CTDSP2-206ENST00000550144 RCAN1P53805 252 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 ANKS1AQ92625 1134 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 CHMP5Q9NZZ3 219 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 MYH8P13535 1937 aa13.5□□□□□ -0.25
CTDSP2-206ENST00000550144 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 CPLX1O14810 134 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 DDAH1O94760 285 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 CALM1P0DP23 149 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 CALM2P0DP24 149 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 CALM3P0DP25 149 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 RCSD1Q6JBY9 416 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 NCOA5Q9HCD5 579 aaKnown RBP13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms