RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 FANCBQ8NB91 859 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 TMEM87AQ8NBN3 555 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 GMLQ99445 158 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
CACNB3-212ENST00000549971 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 PPP1R1BQ9UD71 204 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-212ENST00000549971 SERPINB13Q9UIV8 391 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 FER1L6Q2WGJ9 1857 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 PSDA5PKW4 1024 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 PRDM1O75626 825 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 MBD3O95983 291 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 GNAQP50148 359 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 PLCD1P51178 756 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 GABPAQ06546 454 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 CFAP100Q494V2 611 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 CTCFLQ8NI51 663 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 RNF26Q9BY78 433 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 KAT14Q9H8E8 782 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 SAP30BPQ9UHR5 308 aaKnown RBP14.63□□□□□ -0.07
CACNB3-212ENST00000549971 BCS1LQ9Y276 419 aa14.63□□□□□ -0.07
CACNB3-212ENST00000549971 ATRNL1Q5VV63 1379 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 PSMD14O00487 310 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 MYO1BO43795 1136 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-212ENST00000549971 XBP1P17861 261 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 RASA1P20936 1047 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 KRT85P78386 507 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 AKAP17AQ02040 695 aaKnown RBP14.62□□□□□ -0.07
CACNB3-212ENST00000549971 PICALMQ13492 652 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 TRIM29Q14134 588 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-212ENST00000549971 FAM177A1Q8N128 213 aaPredicted RBP14.62□□□□□ -0.07
CACNB3-212ENST00000549971 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 CDK5RAP2Q96SN8 1893 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 LZTS2Q9BRK4 669 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 KCNQ5Q9NR82 932 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
CACNB3-212ENST00000549971 NFKBIEO00221 500 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 TRAK2O60296 914 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 DEXIO95424 95 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 NOVP48745 357 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 TROAPQ12815 778 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 NTRK3Q16288 839 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 KLHL40Q2TBA0 621 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 BRAPQ7Z569 592 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 STK11IPQ8N1F8 1099 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-212ENST00000549971 CFAP45Q9UL16 551 aa14.61□□□□□ -0.07
CACNB3-212ENST00000549971 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 FDPSP14324 419 aaKnown RBP14.6□□□□□ -0.07
CACNB3-212ENST00000549971 CDC27P30260 824 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
CACNB3-212ENST00000549971 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
CACNB3-212ENST00000549971 FBXO18Q8NFZ0 1043 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 NUP133Q8WUM0 1156 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 DYNLL2Q96FJ2 89 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
CACNB3-212ENST00000549971 MYH1P12882 1939 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 ELP1O95163 1332 aa14.6□□□□□ -0.07
CACNB3-212ENST00000549971 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 RAD17O75943 681 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 TOP1P11387 765 aaKnown RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 SMARCA1P28370 1054 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 CXCL9Q07325 125 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 RESTQ13127 1097 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 FAM47AQ5JRC9 791 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 NKX2-3Q8TAU0 364 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 DPF2Q92785 391 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 SENP2Q9HC62 589 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 DDX4Q9NQI0 724 aaKnown RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
CACNB3-212ENST00000549971 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
CACNB3-212ENST00000549971 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.08
CACNB3-212ENST00000549971 SAFBQ15424 915 aaKnown RBP eCLIP14.58□□□□□ -0.08
CACNB3-212ENST00000549971 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
CACNB3-212ENST00000549971 FOXD4L5Q5VV16 416 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-212ENST00000549971 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
CACNB3-212ENST00000549971 TMTC3Q6ZXV5 915 aa14.58□□□□□ -0.08
CACNB3-212ENST00000549971 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
CACNB3-212ENST00000549971 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms