RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
TROAP-210ENST00000549534 IER5LQ5T953 404 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
TROAP-210ENST00000549534 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
TROAP-210ENST00000549534 A0A0G2JMZ2 1700 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 SEPT4O43236 478 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 CYBAP13498 195 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 LRRC41Q15345 812 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
TROAP-210ENST00000549534 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 TBX21Q9UL17 535 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 PTPRFP10586 1907 aa13.48□□□□□ -0.25
TROAP-210ENST00000549534 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
TROAP-210ENST00000549534 HIBADHP31937 336 aaKnown RBP13.47□□□□□ -0.25
TROAP-210ENST00000549534 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
TROAP-210ENST00000549534 TCP10Q12799 353 aa13.47□□□□□ -0.25
TROAP-210ENST00000549534 ACAP1Q15027 740 aa13.47□□□□□ -0.25
TROAP-210ENST00000549534 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
TROAP-210ENST00000549534 ATOH1Q92858 354 aaPredicted RBP13.47□□□□□ -0.25
TROAP-210ENST00000549534 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
TROAP-210ENST00000549534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.46□□□□□ -0.25
TROAP-210ENST00000549534 IGHA2P01877 340 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
TROAP-210ENST00000549534 CSF2RAP15509 400 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
TROAP-210ENST00000549534 GRIK5Q16478 980 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 PORCNQ9H237 461 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 UBE2ZQ9H832 354 aaPredicted RBP13.46□□□□□ -0.25
TROAP-210ENST00000549534 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.25
TROAP-210ENST00000549534 TXNRD2Q9NNW7 524 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
TROAP-210ENST00000549534 TRANK1O15050 2925 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 RFXAPO00287 272 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 FGBP02675 491 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 IL9P15248 144 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 CYP2C19P33261 490 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 ERVK-24P63145 666 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 SPP2Q13103 211 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
TROAP-210ENST00000549534 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
TROAP-210ENST00000549534 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 IL23AQ9NPF7 189 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
TROAP-210ENST00000549534 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
TROAP-210ENST00000549534 SLC15A5A6NIM6 579 aa13.44□□□□□ -0.26
TROAP-210ENST00000549534 CSF1RP07333 972 aa13.44□□□□□ -0.26
TROAP-210ENST00000549534 HERVK_113P62684 666 aa13.44□□□□□ -0.26
TROAP-210ENST00000549534 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
TROAP-210ENST00000549534 ASCL5Q7RTU5 278 aa13.44□□□□□ -0.26
TROAP-210ENST00000549534 ZNF536O15090 1300 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 PRR23AA6NEV1 266 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 ACRP10323 421 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 RABGGTBP53611 331 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 HMGCS2P54868 508 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 Q3C1V9 767 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 KRT40Q6A162 431 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 DGLUCYQ7Z3D6 616 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 RNF180Q86T96 592 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 IGSF5Q9NSI5 407 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 LOC285556D6RIA3 1793 aa13.43□□□□□ -0.26
TROAP-210ENST00000549534 TPRP12270 2363 aaKnown RBP13.42□□□□□ -0.26
TROAP-210ENST00000549534 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
TROAP-210ENST00000549534 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 APBB1O00213 710 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
TROAP-210ENST00000549534 PTPREP23469 700 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 CCNA1P78396 465 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 NFIAQ12857 509 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 HERC4Q5GLZ8 1057 aaPredicted RBP13.42□□□□□ -0.26
TROAP-210ENST00000549534 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 OLFML2BQ68BL8 750 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
TROAP-210ENST00000549534 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
TROAP-210ENST00000549534 MYH3P11055 1940 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 CFAP47Q6ZTR5 3102 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 FAM186AA6NE01 2351 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
TROAP-210ENST00000549534 MYOGP15173 224 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 GYG1P46976 350 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 NUBP1P53384 320 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms