RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 SFPQP23246 707 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 FEZ1Q99689 392 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 FAM170AA1A519 330 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
LINC00661-204ENST00000549354 ERCC3P19447 782 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
LINC00661-204ENST00000549354 NBPF11Q86T75 865 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 TBC1D10CQ8IV04 446 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 LRP2BPQ9P2M1 347 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 SPTLC2O15270 562 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 KLRK1P26718 216 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 AFMP43652 599 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 PPARDQ03181 441 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 DDR1Q08345 913 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
LINC00661-204ENST00000549354 ARMCX5Q6P1M9 558 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 MRFAP1L1Q96HT8 127 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 ALG1Q9BT22 464 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
LINC00661-204ENST00000549354 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
LINC00661-204ENST00000549354 ST5P78524 1137 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
LINC00661-204ENST00000549354 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ARMT1Q9H993 441 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
LINC00661-204ENST00000549354 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
LINC00661-204ENST00000549354 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 LCORLQ8N3X6 602 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 DPF2Q92785 391 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 DESI2Q9BSY9 194 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 LTBP1Q14766 1721 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ZNF202O95125 648 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 UIMC1Q96RL1 719 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 XDHP47989 1333 aa12.73□□□□□ -0.37
LINC00661-204ENST00000549354 GRIN1Q05586 938 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 MTA3Q9BTC8 594 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 CTAGE5O15320 804 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 CYP7A1P22680 504 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 ADKP55263 362 aaKnown RBP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 FMR1NBQ8N0W7 255 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 ZNF397Q8NF99 534 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 PPP1R13BQ96KQ4 1090 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 CHD4Q14839 1912 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 BBOX1O75936 387 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 KIF20AO95235 890 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 METAP2P50579 478 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
LINC00661-204ENST00000549354 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
LINC00661-204ENST00000549354 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 WDHD1O75717 1129 aaPredicted RBP12.71□□□□□ -0.37
LINC00661-204ENST00000549354 SEC31AO94979 1220 aaKnown RBP12.71□□□□□ -0.37
LINC00661-204ENST00000549354 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
LINC00661-204ENST00000549354 ANKRD31Q8N7Z5 1873 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
LINC00661-204ENST00000549354 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 PLIN2Q99541 437 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
LINC00661-204ENST00000549354 IFIT3O14879 490 aaKnown RBP12.71□□□□□ -0.38
LINC00661-204ENST00000549354 TFRCP02786 760 aaKnown RBP12.71□□□□□ -0.38
LINC00661-204ENST00000549354 SLFN14P0C7P3 912 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 NR5A1Q13285 461 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 CYB5R4Q7L1T6 521 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.38
LINC00661-204ENST00000549354 NAPBQ9H115 298 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.38
LINC00661-204ENST00000549354 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
LINC00661-204ENST00000549354 PFKFB1P16118 471 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 RXRBP28702 533 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 CDC25AP30304 524 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 SYKP43405 635 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
LINC00661-204ENST00000549354 IGDCC4Q8TDY8 1250 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms