RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
DDX54-206ENST00000549271 CAP2P40123 477 aa15.08■□□□□ 0
DDX54-206ENST00000549271 RGS2P41220 211 aa15.08■□□□□ 0
DDX54-206ENST00000549271 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
DDX54-206ENST00000549271 RTP1P59025 263 aa15.08■□□□□ 0
DDX54-206ENST00000549271 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
DDX54-206ENST00000549271 PICALMQ13492 652 aa15.08■□□□□ 0
DDX54-206ENST00000549271 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
DDX54-206ENST00000549271 APBA2Q99767 749 aa15.08■□□□□ 0
DDX54-206ENST00000549271 PORCNQ9H237 461 aa15.08■□□□□ 0
DDX54-206ENST00000549271 RBPJLQ9UBG7 517 aa15.08■□□□□ 0
DDX54-206ENST00000549271 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
DDX54-206ENST00000549271 USP17L5A8MUK1 530 aa15.07■□□□□ 0
DDX54-206ENST00000549271 DNM1LO00429 736 aa15.07■□□□□ 0
DDX54-206ENST00000549271 BCAR3O75815 825 aa15.07■□□□□ 0
DDX54-206ENST00000549271 HERVK_113P62684 666 aa15.07■□□□□ 0
DDX54-206ENST00000549271 Q3C1V9 767 aa15.07■□□□□ 0
DDX54-206ENST00000549271 GPR142Q7Z601 462 aa15.07■□□□□ 0
DDX54-206ENST00000549271 ARHGAP45Q92619 1136 aa15.07■□□□□ 0
DDX54-206ENST00000549271 LPAR1Q92633 364 aa15.07■□□□□ 0
DDX54-206ENST00000549271 FAM122AQ96E09 287 aa15.07■□□□□ 0
DDX54-206ENST00000549271 SIL1Q9H173 461 aa15.07■□□□□ 0
DDX54-206ENST00000549271 PDS5AQ29RF7 1337 aaKnown RBP15.07■□□□□ 0
DDX54-206ENST00000549271 SIPA1L1O43166 1804 aa15.06■□□□□ 0
DDX54-206ENST00000549271 BTDP43251 543 aa15.06■□□□□ 0
DDX54-206ENST00000549271 RHBDL3P58872 404 aa15.06■□□□□ 0
DDX54-206ENST00000549271 ERVK-9P63128 1117 aa15.06■□□□□ 0
DDX54-206ENST00000549271 ERVK-24P63145 666 aa15.06■□□□□ 0
DDX54-206ENST00000549271 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
DDX54-206ENST00000549271 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
DDX54-206ENST00000549271 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
DDX54-206ENST00000549271 WDR18Q9BV38 432 aa15.06■□□□□ 0
DDX54-206ENST00000549271 DDX20Q9UHI6 824 aaKnown RBP15.06■□□□□ 0
DDX54-206ENST00000549271 MSCO60682 206 aa15.05■□□□□ -0
DDX54-206ENST00000549271 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
DDX54-206ENST00000549271 PHKA1P46020 1223 aa15.05■□□□□ -0
DDX54-206ENST00000549271 BACE1P56817 501 aa15.05■□□□□ -0
DDX54-206ENST00000549271 MAP2K5Q13163 448 aa15.05■□□□□ -0
DDX54-206ENST00000549271 MTMR2Q13614 643 aa15.05■□□□□ -0
DDX54-206ENST00000549271 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
DDX54-206ENST00000549271 SLF2Q8IX21 1173 aa15.05■□□□□ -0
DDX54-206ENST00000549271 BADQ92934 168 aa15.05■□□□□ -0
DDX54-206ENST00000549271 AS3MTQ9HBK9 375 aa15.05■□□□□ -0
DDX54-206ENST00000549271 FLRT1Q9NZU1 646 aa15.05■□□□□ -0
DDX54-206ENST00000549271 ATP11BQ9Y2G3 1177 aa15.05■□□□□ -0
DDX54-206ENST00000549271 MROH7-TTC4A0A0A0MT08 1334 aa15.05■□□□□ -0
DDX54-206ENST00000549271 GPR75-ASB3A0A0A6YYF3 556 aa15.04■□□□□ -0
DDX54-206ENST00000549271 MTX1Q13505 466 aa15.04■□□□□ -0
DDX54-206ENST00000549271 SNX17Q15036 470 aa15.04■□□□□ -0
DDX54-206ENST00000549271 CCDC102BQ68D86 513 aa15.04■□□□□ -0
DDX54-206ENST00000549271 SLC39A5Q6ZMH5 540 aa15.04■□□□□ -0
DDX54-206ENST00000549271 PA2G4Q9UQ80 394 aaKnown RBP15.04■□□□□ -0
DDX54-206ENST00000549271 TNNQ9UQP3 1299 aa15.04■□□□□ -0
DDX54-206ENST00000549271 CHD9Q3L8U1 2897 aa15.03■□□□□ -0
DDX54-206ENST00000549271 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
DDX54-206ENST00000549271 GRIN2CQ14957 1233 aa15.03■□□□□ -0
DDX54-206ENST00000549271 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
DDX54-206ENST00000549271 ZNF384Q8TF68 577 aa15.03■□□□□ -0
DDX54-206ENST00000549271 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
DDX54-206ENST00000549271 MEIS3Q99687 375 aa15.03■□□□□ -0
DDX54-206ENST00000549271 PDLIM7Q9NR12 457 aa15.03■□□□□ -0
DDX54-206ENST00000549271 TMOD4Q9NZQ9 345 aa15.03■□□□□ -0
DDX54-206ENST00000549271 C19orf81C9J6K1 198 aa15.02■□□□□ -0
DDX54-206ENST00000549271 IGHA2P01877 340 aa15.02■□□□□ -0
DDX54-206ENST00000549271 GNAI3P08754 354 aa15.02■□□□□ -0
DDX54-206ENST00000549271 TRIM27P14373 513 aa15.02■□□□□ -0
DDX54-206ENST00000549271 ADORA1P30542 326 aa15.02■□□□□ -0
DDX54-206ENST00000549271 RASGRF1Q13972 1273 aa15.02■□□□□ -0
DDX54-206ENST00000549271 CCAR1Q8IX12 1150 aaKnown RBP15.02■□□□□ -0
DDX54-206ENST00000549271 TRPV1Q8NER1 839 aa15.02■□□□□ -0
DDX54-206ENST00000549271 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
DDX54-206ENST00000549271 ATXN2LQ8WWM7 1075 aaKnown RBP15.02■□□□□ -0
DDX54-206ENST00000549271 PRDM5Q9NQX1 630 aaPredicted RBP15.02■□□□□ -0
DDX54-206ENST00000549271 HERC5Q9UII4 1024 aaKnown RBP15.02■□□□□ -0
DDX54-206ENST00000549271 AKAP2Q9Y2D5 859 aa15.02■□□□□ -0
DDX54-206ENST00000549271 TRIM43BA6NCK2 446 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
DDX54-206ENST00000549271 MAP4K4O95819 1239 aaPredicted RBP15.01□□□□□ -0.01
DDX54-206ENST00000549271 HOXC6P09630 235 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 TIMM10P62072 90 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 JAG1P78504 1218 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 GJC2Q5T442 439 aaPredicted RBP15.01□□□□□ -0.01
DDX54-206ENST00000549271 SPTY2D1Q68D10 685 aaPredicted RBP15.01□□□□□ -0.01
DDX54-206ENST00000549271 SH3RF1Q7Z6J0 888 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 TRIM43Q96BQ3 446 aaPredicted RBP15.01□□□□□ -0.01
DDX54-206ENST00000549271 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 ABCF2Q9UG63 623 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 REV3LO60673 3130 aa15.01□□□□□ -0.01
DDX54-206ENST00000549271 CDK5RAP2Q96SN8 1893 aa15□□□□□ -0.01
DDX54-206ENST00000549271 A0A1B0GUL7 405 aa15□□□□□ -0.01
DDX54-206ENST00000549271 SRGAP3O43295 1099 aa15□□□□□ -0.01
DDX54-206ENST00000549271 CNMDO75829 334 aa15□□□□□ -0.01
DDX54-206ENST00000549271 ASNSP08243 561 aa15□□□□□ -0.01
DDX54-206ENST00000549271 CNGA1P29973 690 aa15□□□□□ -0.01
DDX54-206ENST00000549271 MECOMQ03112 1051 aa15□□□□□ -0.01
DDX54-206ENST00000549271 C1orf53Q5VUE5 145 aa15□□□□□ -0.01
DDX54-206ENST00000549271 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
DDX54-206ENST00000549271 ARRDC4Q8NCT1 418 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms