RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PCDH12Q9NPG4 1184 aa5.09□□□□□ -1.59
APAF1-208ENST00000549007 DNAJB12Q9NXW2 375 aaKnown RBP5.09□□□□□ -1.59
APAF1-208ENST00000549007 POLR3KQ9Y2Y1 108 aaPredicted RBP5.09□□□□□ -1.59
APAF1-208ENST00000549007 PPLO60437 1756 aa5.09□□□□□ -1.6
APAF1-208ENST00000549007 CDC14CA4D256 554 aa5.09□□□□□ -1.6
APAF1-208ENST00000549007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.09□□□□□ -1.6
APAF1-208ENST00000549007 CWF19L2Q2TBE0 894 aaKnown RBP5.09□□□□□ -1.6
APAF1-208ENST00000549007 MTERF2Q49AM1 385 aa5.09□□□□□ -1.6
APAF1-208ENST00000549007 RNF187Q5TA31 235 aaPredicted RBP5.09□□□□□ -1.6
APAF1-208ENST00000549007 FAM35AQ86V20 835 aa5.09□□□□□ -1.6
APAF1-208ENST00000549007 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.6
APAF1-208ENST00000549007 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.09□□□□□ -1.6
APAF1-208ENST00000549007 ZNF837Q96EG3 531 aaPredicted RBP5.09□□□□□ -1.6
APAF1-208ENST00000549007 IQGAP1P46940 1657 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 METP08581 1390 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 ADAMTS13Q76LX8 1427 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 PPP1R12AO14974 1030 aaPredicted RBP5.08□□□□□ -1.6
APAF1-208ENST00000549007 SOX18P35713 384 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 VN1R5Q7Z5H4 357 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 CLEC4MQ9H2X3 399 aaPredicted RBP5.08□□□□□ -1.6
APAF1-208ENST00000549007 PLEKHG1Q9ULL1 1385 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 SAFB2Q14151 953 aaKnown RBP eCLIP5.08□□□□□ -1.6
APAF1-208ENST00000549007 FIGNL1Q6PIW4 674 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 SYT9Q86SS6 491 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 RPGRIP1LQ68CZ1 1315 aa5.08□□□□□ -1.6
APAF1-208ENST00000549007 POLR1AO95602 1720 aaPredicted RBP5.08□□□□□ -1.6
APAF1-208ENST00000549007 PDPK1O15530 556 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 BPNT1O95861 308 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 GHRHP01286 108 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 SELPP16109 830 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 GIPRP48546 466 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 GYS2P54840 703 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 PCDH1Q08174 1060 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 TMEM102Q8N9M5 508 aaPredicted RBP5.07□□□□□ -1.6
APAF1-208ENST00000549007 NDFIP2Q9NV92 336 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 PRR12Q9ULL5 1215 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 STRIP2Q9ULQ0 834 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 NRXN3Q9Y4C0 1643 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 IFT172Q9UG01 1749 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 ENPP3O14638 875 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 AXIN1O15169 862 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 RLBP1P12271 317 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 EPHA1P21709 976 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 AMPD3Q01432 767 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 CCDC155Q8N6L0 562 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 STAG1Q8WVM7 1258 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 NOP58Q9Y2X3 529 aaKnown RBP5.07□□□□□ -1.6
APAF1-208ENST00000549007 CD2APQ9Y5K6 639 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 KDM5AP29375 1690 aaKnown RBP5.07□□□□□ -1.6
APAF1-208ENST00000549007 PIK3C2GO75747 1445 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 PRAG1Q86YV5 1406 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 DNAJA2O60884 412 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 PARNO95453 639 aaKnown RBP5.07□□□□□ -1.6
APAF1-208ENST00000549007 LLGL2Q6P1M3 1020 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 NUDT8Q8WV74 236 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 LGR4Q9BXB1 951 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 SMG9Q9H0W8 520 aaKnown RBP5.07□□□□□ -1.6
APAF1-208ENST00000549007 ZNRF3Q9ULT6 936 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 MSRB2Q9Y3D2 182 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 CLSPNQ9HAW4 1339 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 PTPRUQ92729 1446 aa5.07□□□□□ -1.6
APAF1-208ENST00000549007 C2CD2LO14523 706 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 CILPO75339 1184 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 HCLS1P14317 486 aaPredicted RBP5.06□□□□□ -1.6
APAF1-208ENST00000549007 KCNA6P17658 529 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 GPLD1P80108 840 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
APAF1-208ENST00000549007 INPP5AQ14642 412 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 PERM1Q5SV97 790 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 CSADQ9Y600 493 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 MYOM2P54296 1465 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 ASXL1Q8IXJ9 1541 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 ALKQ9UM73 1620 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 IBSPP21815 317 aaPredicted RBP5.06□□□□□ -1.6
APAF1-208ENST00000549007 FGFR3P22607 806 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 NRLP54845 237 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 UBR7Q8N806 425 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 BSNDQ8WZ55 320 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 KDM2BQ8NHM5 1336 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 MED14O60244 1454 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 DNAJC6O75061 913 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 POLR2BP30876 1174 aaKnown RBP5.06□□□□□ -1.6
APAF1-208ENST00000549007 MPP2Q14168 576 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 CBX2Q14781 532 aaPredicted RBP5.06□□□□□ -1.6
APAF1-208ENST00000549007 TRPM4Q8TD43 1214 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 SPC25Q9HBM1 224 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 PTCH2Q9Y6C5 1203 aa5.06□□□□□ -1.6
APAF1-208ENST00000549007 SLC35F4A4IF30 521 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 CLSTN1O94985 981 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 IFFO2Q5TF58 517 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 WAPLQ7Z5K2 1190 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 TTC6Q86TZ1 520 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 APPBP2Q92624 585 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 C14orf93Q9H972 538 aaKnown RBP5.05□□□□□ -1.6
APAF1-208ENST00000549007 NRXN1Q9ULB1 1477 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 SETBP1Q9Y6X0 1596 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 ROCK2O75116 1388 aaKnown RBP5.05□□□□□ -1.6
APAF1-208ENST00000549007 PLEKHH1Q9ULM0 1364 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 ASMTLO95671 621 aa5.05□□□□□ -1.6
APAF1-208ENST00000549007 B3GALT4O96024 378 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms