RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 CDC23Q9UJX2 597 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 MYH7P12883 1935 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 PLCD1P51178 756 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 RBL2Q08999 1139 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.098e-8■■■■□ 25.2
HDAC7-228ENST00000548938 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
HDAC7-228ENST00000548938 MYO1CO00159 1063 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 KIF5CO60282 957 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 N4BP1O75113 896 aaKnown RBP15.63■□□□□ 0.09
HDAC7-228ENST00000548938 SSRP1Q08945 709 aaKnown RBP15.63■□□□□ 0.09
HDAC7-228ENST00000548938 ZNF569Q5MCW4 686 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 IGSF22Q8N9C0 903 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 PIGBQ92521 554 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 ZFP91Q96JP5 570 aaPredicted RBP15.63■□□□□ 0.09
HDAC7-228ENST00000548938 TMEM87BQ96K49 555 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 ACTN4O43707 911 aaKnown RBP15.63■□□□□ 0.09
HDAC7-228ENST00000548938 TOM1O60784 492 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 MMP1P03956 469 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 WWC2Q6AWC2 1192 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 C10orf67Q8IYJ2 551 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 HNRNPLLQ8WVV9 542 aaKnown RBP15.63■□□□□ 0.09
HDAC7-228ENST00000548938 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
HDAC7-228ENST00000548938 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 STX17P56962 302 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 KLHL10Q6JEL2 608 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 SGMS1Q86VZ5 419 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 CEP112Q8N8E3 955 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 TRIML1Q8N9V2 468 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 CWC15Q9P013 229 aaKnown RBP15.62■□□□□ 0.09
HDAC7-228ENST00000548938 RAB21Q9UL25 225 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 ASAP1Q9ULH1 1129 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 RIC1Q4ADV7 1423 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 STK36Q9NRP7 1315 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
HDAC7-228ENST00000548938 FMNL1O95466 1100 aaPredicted RBP15.62■□□□□ 0.09
HDAC7-228ENST00000548938 ATP2B1P20020 1258 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 ACTN2P35609 894 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 USP5P45974 858 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 NR5A1Q13285 461 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 HDXQ7Z353 690 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 PPFIBP1Q86W92 1011 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 MSANTD4Q8NCY6 345 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 RASSF4Q9H2L5 321 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 ABCB6Q9NP58 842 aa15.62■□□□□ 0.09
HDAC7-228ENST00000548938 PIH1D3Q9NQM4 214 aaKnown RBP15.62■□□□□ 0.09
HDAC7-228ENST00000548938 NUTM2BA6NNL0 878 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 NUTM2EB1AL46 878 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 RHOXF2BP0C7M4 288 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 RHOXF2Q9BQY4 288 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SLC12A7Q9Y666 1083 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 ATRNO75882 1429 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 MFAP3LO75121 409 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 CD44P16070 742 aaKnown RBP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 ERCC5P28715 1186 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SAFBQ15424 915 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SRLQ86TD4 932 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SLC35F6Q8N357 371 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 CCDC82Q8N4S0 544 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SPATA20Q8TB22 786 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
HDAC7-228ENST00000548938 ZNF532Q9HCE3 1301 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 SYNRGQ9UMZ2 1314 aa15.61■□□□□ 0.09
HDAC7-228ENST00000548938 EXOC5O00471 708 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 ABL1P00519 1130 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 CASP1P29466 404 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 VSNL1P62760 191 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 ACRBPQ8NEB7 543 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 CSRNP2Q9H175 543 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 L1RE1Q9UN81 338 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 FAN1Q9Y2M0 1017 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 IFIT3O14879 490 aaKnown RBP15.6■□□□□ 0.09
HDAC7-228ENST00000548938 PBX1P40424 430 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 RILPL1Q5EBL4 403 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 RASGRP2Q7LDG7 609 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 CMTR1Q8N1G2 835 aaKnown RBP15.6■□□□□ 0.09
HDAC7-228ENST00000548938 FAM89AQ96GI7 184 aa15.6■□□□□ 0.09
HDAC7-228ENST00000548938 NAA15Q9BXJ9 866 aaKnown RBP15.6■□□□□ 0.09
HDAC7-228ENST00000548938 ADD3Q9UEY8 706 aaKnown RBP15.6■□□□□ 0.09
HDAC7-228ENST00000548938 RRP15Q9Y3B9 282 aaKnown RBP15.6■□□□□ 0.09
HDAC7-228ENST00000548938 CTAGE9A4FU28 777 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 POTEB2H3BUK9 544 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 IFNAR1P17181 557 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 CASP14P31944 242 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 CTDSPL2Q05D32 466 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 METTL24Q5JXM2 366 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 SMYD4Q8IYR2 804 aaPredicted RBP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 IQUBQ8NA54 791 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 ISCA1Q9BUE6 129 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 ZSWIM5Q9P217 1185 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 RSPH14Q9UHP6 348 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 WWC3Q9ULE0 1092 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 AKAP11Q9UKA4 1901 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms