RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MEGF6O75095 1541 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 RHOXF2BP0C7M4 288 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 ADD2P35612 726 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 PBX1P40424 430 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 CASP8Q14790 479 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 SLC35F6Q8N357 371 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 NAPGQ99747 312 aaPredicted RBP26.27■■□□□ 1.8
NPAS3-206ENST00000548645 RHOXF2Q9BQY4 288 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 CEP131Q9UPN4 1083 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 SRPRBQ9Y5M8 271 aaKnown RBP26.27■■□□□ 1.8
NPAS3-206ENST00000548645 SLC12A7Q9Y666 1083 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 ECM29Q5VYK3 1845 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 A0A0U1RQJ8 604 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 CYP27B1O15528 508 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 N4BP1O75113 896 aaKnown RBP26.27■■□□□ 1.8
NPAS3-206ENST00000548645 ATRIPQ8WXE1 791 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 MYL10Q9BUA6 226 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 FOXP1Q9H334 677 aaPredicted RBP26.27■■□□□ 1.8
NPAS3-206ENST00000548645 ADD3Q9UEY8 706 aaKnown RBP26.27■■□□□ 1.8
NPAS3-206ENST00000548645 LAMB4A4D0S4 1761 aa26.27■■□□□ 1.8
NPAS3-206ENST00000548645 LIFRP42702 1097 aa26.26■■□□□ 1.79
NPAS3-206ENST00000548645 MKRN1Q9UHC7 482 aaKnown RBP26.26■■□□□ 1.79
NPAS3-206ENST00000548645 VSNL1P62760 191 aa26.26■■□□□ 1.79
NPAS3-206ENST00000548645 CTR9Q6PD62 1173 aa26.26■■□□□ 1.79
NPAS3-206ENST00000548645 ZBTB3Q9H5J0 574 aa26.26■■□□□ 1.79
NPAS3-206ENST00000548645 SUGCTQ9HAC7 445 aa26.26■■□□□ 1.79
NPAS3-206ENST00000548645 UBE2Q2LH0YL09 131 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 IFNAR1P17181 557 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 CCDC102AQ96A19 550 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 SYNRGQ9UMZ2 1314 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 MYH7P12883 1935 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 PLEKHG2Q9H7P9 1386 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 MYO1AQ9UBC5 1043 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 WWC3Q9ULE0 1092 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 SEMA3EO15041 775 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 TAF7LQ5H9L4 462 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 MED4Q9NPJ6 270 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 TBC1D2BQ9UPU7 963 aa26.25■■□□□ 1.79
NPAS3-206ENST00000548645 CASP14P31944 242 aa26.24■■□□□ 1.79
NPAS3-206ENST00000548645 TRIM22Q8IYM9 498 aa26.24■■□□□ 1.79
NPAS3-206ENST00000548645 WDR17Q8IZU2 1322 aa26.24■■□□□ 1.79
NPAS3-206ENST00000548645 FECHP22830 423 aa26.24■■□□□ 1.79
NPAS3-206ENST00000548645 TMTC1Q8IUR5 882 aa26.24■■□□□ 1.79
NPAS3-206ENST00000548645 ATRNO75882 1429 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 CDKAL1Q5VV42 579 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 WWC2Q6AWC2 1192 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 KRT28Q7Z3Y7 464 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 SEC31BQ9NQW1 1179 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 KCNJ14Q9UNX9 436 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 PCDHB6Q9Y5E3 794 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 TTF1Q15361 905 aaPredicted RBP26.23■■□□□ 1.79
NPAS3-206ENST00000548645 KLHL10Q6JEL2 608 aa26.23■■□□□ 1.79
NPAS3-206ENST00000548645 CDC5LQ99459 802 aaKnown RBP26.23■■□□□ 1.79
NPAS3-206ENST00000548645 ITIH6Q6UXX5 1313 aa26.22■■□□□ 1.79
NPAS3-206ENST00000548645 IFIT3O14879 490 aaKnown RBP26.22■■□□□ 1.79
NPAS3-206ENST00000548645 UBE3CQ15386 1083 aa26.22■■□□□ 1.79
NPAS3-206ENST00000548645 NUP188Q5SRE5 1749 aa26.22■■□□□ 1.79
NPAS3-206ENST00000548645 MCAMP43121 646 aa26.22■■□□□ 1.79
NPAS3-206ENST00000548645 CUL4BQ13620 913 aa26.22■■□□□ 1.79
NPAS3-206ENST00000548645 STX17P56962 302 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 CSRNP2Q9H175 543 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 GUCY1A2P33402 732 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 NOP2P46087 812 aaKnown RBP26.21■■□□□ 1.79
NPAS3-206ENST00000548645 ACRBPQ8NEB7 543 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 GLI3P10071 1580 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 GYPCP04921 128 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 CSB-PGBD3P0DP91 1061 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 PLCD3Q8N3E9 789 aa26.21■■□□□ 1.79
NPAS3-206ENST00000548645 MAGEA9P43362 315 aa26.2■■□□□ 1.79
NPAS3-206ENST00000548645 WDR93Q6P2C0 686 aa26.2■■□□□ 1.79
NPAS3-206ENST00000548645 FXR1P51114 621 aaKnown RBP eCLIP26.2■■□□□ 1.78
NPAS3-206ENST00000548645 USP49Q70CQ1 688 aa26.2■■□□□ 1.78
NPAS3-206ENST00000548645 A1BGP04217 495 aa26.19■■□□□ 1.78
NPAS3-206ENST00000548645 CD44P16070 742 aaKnown RBP26.19■■□□□ 1.78
NPAS3-206ENST00000548645 HSPA2P54652 639 aa26.19■■□□□ 1.78
NPAS3-206ENST00000548645 ZFP91Q96JP5 570 aaPredicted RBP26.19■■□□□ 1.78
NPAS3-206ENST00000548645 IDH1O75874 414 aaKnown RBP26.19■■□□□ 1.78
NPAS3-206ENST00000548645 STRN4Q9NRL3 753 aa26.19■■□□□ 1.78
NPAS3-206ENST00000548645 ZSWIM5Q9P217 1185 aa26.19■■□□□ 1.78
NPAS3-206ENST00000548645 MYO6Q9UM54 1294 aa26.19■■□□□ 1.78
NPAS3-206ENST00000548645 IFIT5Q13325 482 aaKnown RBP26.18■■□□□ 1.78
NPAS3-206ENST00000548645 VIPAS39Q9H9C1 493 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 PHACTR2O75167 634 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 DEXIO95424 95 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 TFRCP02786 760 aaKnown RBP26.18■■□□□ 1.78
NPAS3-206ENST00000548645 ATP2B1P20020 1258 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 NR5A1Q13285 461 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 ALX1Q15699 326 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 CYP26C1Q6V0L0 522 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 AATFQ9NY61 560 aaKnown RBP eCLIP26.18■■□□□ 1.78
NPAS3-206ENST00000548645 NID2Q14112 1375 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 ZNF532Q9HCE3 1301 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 AFMP43652 599 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 RTN1Q16799 776 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 FOXR1Q6PIV2 292 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 CCDC148Q8NFR7 591 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 ZNF512BQ96KM6 892 aaPredicted RBP26.18■■□□□ 1.78
NPAS3-206ENST00000548645 GSDMAQ96QA5 445 aa26.18■■□□□ 1.78
NPAS3-206ENST00000548645 NOA1Q8NC60 698 aaKnown RBP26.17■■□□□ 1.78
NPAS3-206ENST00000548645 ZBTB9Q96C00 473 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms