RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 NRG2O14511 850 aaPredicted RBP6.01□□□□□ -1.45
APP-217ENST00000548570 FGAP02671 866 aa6.01□□□□□ -1.45
APP-217ENST00000548570 VEGFAP15692 232 aaPredicted RBP6.01□□□□□ -1.45
APP-217ENST00000548570 PLCD1P51178 756 aa6.01□□□□□ -1.45
APP-217ENST00000548570 JAG1P78504 1218 aa6.01□□□□□ -1.45
APP-217ENST00000548570 MAP3K10Q02779 954 aa6.01□□□□□ -1.45
APP-217ENST00000548570 RASA3Q14644 834 aa6.01□□□□□ -1.45
APP-217ENST00000548570 MAP1SQ66K74 1059 aaPredicted RBP6.01□□□□□ -1.45
APP-217ENST00000548570 ZSCAN25Q6NSZ9 544 aa6.01□□□□□ -1.45
APP-217ENST00000548570 CTR9Q6PD62 1173 aa6.01□□□□□ -1.45
APP-217ENST00000548570 METTL16Q86W50 562 aaKnown RBP6.01□□□□□ -1.45
APP-217ENST00000548570 MAPKAPK5Q8IW41 473 aa6.01□□□□□ -1.45
APP-217ENST00000548570 IFNL3Q8IZI9 196 aa6.01□□□□□ -1.45
APP-217ENST00000548570 TGFBRAP1Q8WUH2 860 aa6.01□□□□□ -1.45
APP-217ENST00000548570 MAP4K1Q92918 833 aa6.01□□□□□ -1.45
APP-217ENST00000548570 AIDAQ96BJ3 306 aa6.01□□□□□ -1.45
APP-217ENST00000548570 GLIS2Q9BZE0 524 aaPredicted RBP6.01□□□□□ -1.45
APP-217ENST00000548570 TMEM39BQ9GZU3 492 aa6.01□□□□□ -1.45
APP-217ENST00000548570 OSBPL5Q9H0X9 879 aaPredicted RBP6.01□□□□□ -1.45
APP-217ENST00000548570 INCENPQ9NQS7 918 aa6.01□□□□□ -1.45
APP-217ENST00000548570 DIAPH3Q9NSV4 1193 aa6.01□□□□□ -1.45
APP-217ENST00000548570 HDAC9Q9UKV0 1011 aa6.01□□□□□ -1.45
APP-217ENST00000548570 FZD1Q9UP38 647 aa6.01□□□□□ -1.45
APP-217ENST00000548570 SLC4A4Q9Y6R1 1079 aa6.01□□□□□ -1.45
APP-217ENST00000548570 RAD50Q92878 1312 aa6□□□□□ -1.45
APP-217ENST00000548570 SBF1O95248 1867 aa6□□□□□ -1.45
APP-217ENST00000548570 PATL2C9JE40 543 aaKnown RBP6□□□□□ -1.45
APP-217ENST00000548570 USP17L12C9JPN9 530 aa6□□□□□ -1.45
APP-217ENST00000548570 USP17L21D6R901 530 aa6□□□□□ -1.45
APP-217ENST00000548570 HIP1O00291 1037 aa6□□□□□ -1.45
APP-217ENST00000548570 TRAF5O00463 557 aa6□□□□□ -1.45
APP-217ENST00000548570 ENTPD3O75355 529 aa6□□□□□ -1.45
APP-217ENST00000548570 BAG3O95817 575 aa6□□□□□ -1.45
APP-217ENST00000548570 YY1P25490 414 aa6□□□□□ -1.45
APP-217ENST00000548570 LMOD1P29536 600 aaPredicted RBP6□□□□□ -1.45
APP-217ENST00000548570 GABPAQ06546 454 aa6□□□□□ -1.45
APP-217ENST00000548570 TCP10Q12799 353 aa6□□□□□ -1.45
APP-217ENST00000548570 PICALMQ13492 652 aa6□□□□□ -1.45
APP-217ENST00000548570 NECTIN1Q15223 517 aa6□□□□□ -1.45
APP-217ENST00000548570 ALX1Q15699 326 aa6□□□□□ -1.45
APP-217ENST00000548570 SHROOM1Q2M3G4 852 aaPredicted RBP6□□□□□ -1.45
APP-217ENST00000548570 SLC4A8Q2Y0W8 1093 aa6□□□□□ -1.45
APP-217ENST00000548570 NBPF12Q5TAG4 269 aaPredicted RBP6□□□□□ -1.45
APP-217ENST00000548570 C12orf60Q5U649 245 aa6□□□□□ -1.45
APP-217ENST00000548570 FKBP1CQ5VVH2 108 aa6□□□□□ -1.45
APP-217ENST00000548570 STOX1Q6ZVD7 989 aa6□□□□□ -1.45
APP-217ENST00000548570 USP48Q86UV5 1035 aa6□□□□□ -1.45
APP-217ENST00000548570 SLF2Q8IX21 1173 aa6□□□□□ -1.45
APP-217ENST00000548570 TEX11Q8IYF3 940 aa6□□□□□ -1.45
APP-217ENST00000548570 ZC3H15Q8WU90 426 aaKnown RBP6□□□□□ -1.45
APP-217ENST00000548570 FAM151AQ8WW52 585 aa6□□□□□ -1.45
APP-217ENST00000548570 KCNB2Q92953 911 aa6□□□□□ -1.45
APP-217ENST00000548570 DYNLL2Q96FJ2 89 aa6□□□□□ -1.45
APP-217ENST00000548570 DSCC1Q9BVC3 393 aa6□□□□□ -1.45
APP-217ENST00000548570 USP26Q9BXU7 913 aa6□□□□□ -1.45
APP-217ENST00000548570 BACH2Q9BYV9 841 aa6□□□□□ -1.45
APP-217ENST00000548570 DEFB129Q9H1M3 183 aa6□□□□□ -1.45
APP-217ENST00000548570 VEZTQ9HBM0 779 aa6□□□□□ -1.45
APP-217ENST00000548570 EMILIN3Q9NT22 766 aa6□□□□□ -1.45
APP-217ENST00000548570 SAP30BPQ9UHR5 308 aaKnown RBP6□□□□□ -1.45
APP-217ENST00000548570 PALD1Q9ULE6 856 aa6□□□□□ -1.45
APP-217ENST00000548570 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
APP-217ENST00000548570 DOCK2Q92608 1830 aa5.99□□□□□ -1.45
APP-217ENST00000548570 FAM196BA6NMK8 535 aa5.99□□□□□ -1.45
APP-217ENST00000548570 CYP21A2P08686 494 aa5.99□□□□□ -1.45
APP-217ENST00000548570 FGRP09769 529 aa5.99□□□□□ -1.45
APP-217ENST00000548570 SBK1Q52WX2 424 aa5.99□□□□□ -1.45
APP-217ENST00000548570 EAPPQ56P03 285 aaPredicted RBP5.99□□□□□ -1.45
APP-217ENST00000548570 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
APP-217ENST00000548570 FAM83AQ86UY5 434 aa5.99□□□□□ -1.45
APP-217ENST00000548570 PNMA8AQ86V59 439 aaPredicted RBP5.99□□□□□ -1.45
APP-217ENST00000548570 LDHDQ86WU2 507 aa5.99□□□□□ -1.45
APP-217ENST00000548570 TBC1D10CQ8IV04 446 aa5.99□□□□□ -1.45
APP-217ENST00000548570 SLC44A5Q8NCS7 719 aa5.99□□□□□ -1.45
APP-217ENST00000548570 KIF2CQ99661 725 aa5.99□□□□□ -1.45
APP-217ENST00000548570 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.99□□□□□ -1.45
APP-217ENST00000548570 CRNKL1Q9BZJ0 848 aaKnown RBP5.99□□□□□ -1.45
APP-217ENST00000548570 PRKD2Q9BZL6 878 aa5.99□□□□□ -1.45
APP-217ENST00000548570 ATP8A2Q9NTI2 1148 aa5.99□□□□□ -1.45
APP-217ENST00000548570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
APP-217ENST00000548570 RBM8AQ9Y5S9 174 aaKnown RBP5.99□□□□□ -1.45
APP-217ENST00000548570 V9GY48 417 aaPredicted RBP5.99□□□□□ -1.45
APP-217ENST00000548570 ZMYM6O95789 1325 aa5.99□□□□□ -1.45
APP-217ENST00000548570 PASKQ96RG2 1323 aa5.99□□□□□ -1.45
APP-217ENST00000548570 COL2A1P02458 1487 aaPredicted RBP5.98□□□□□ -1.45
APP-217ENST00000548570 PSME4Q14997 1843 aa5.98□□□□□ -1.45
APP-217ENST00000548570 PHF20L1A8MW92 1017 aa5.98□□□□□ -1.45
APP-217ENST00000548570 SLC27A2O14975 620 aa5.98□□□□□ -1.45
APP-217ENST00000548570 GNAT2P19087 354 aa5.98□□□□□ -1.45
APP-217ENST00000548570 SHMT1P34896 483 aa5.98□□□□□ -1.45
APP-217ENST00000548570 HSPA4P34932 840 aa5.98□□□□□ -1.45
APP-217ENST00000548570 USP5P45974 858 aa5.98□□□□□ -1.45
APP-217ENST00000548570 HAND2P61296 217 aa5.98□□□□□ -1.45
APP-217ENST00000548570 CTDSPL2Q05D32 466 aa5.98□□□□□ -1.45
APP-217ENST00000548570 PPARAQ07869 468 aa5.98□□□□□ -1.45
APP-217ENST00000548570 LRRFIP1Q32MZ4 808 aaKnown RBP5.98□□□□□ -1.45
APP-217ENST00000548570 ADCK5Q3MIX3 580 aa5.98□□□□□ -1.45
APP-217ENST00000548570 CST9Q5W186 159 aa5.98□□□□□ -1.45
APP-217ENST00000548570 MOB2Q70IA6 237 aa5.98□□□□□ -1.45
APP-217ENST00000548570 KRT26Q7Z3Y9 468 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms