RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 GPR25O00155 361 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 IGF2BP3O00425 579 aaKnown RBP eCLIP13.98□□□□□ -0.174e-6■■■■□ 19.3
TUBA1C-203ENST00000548470 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 PTH1RQ03431 593 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 WDR18Q9BV38 432 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 TSKSQ9UJT2 592 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
TUBA1C-203ENST00000548470 CCDC171Q6TFL3 1326 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 RAD50Q92878 1312 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 PATL2C9JE40 543 aaKnown RBP13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 GPAA1O43292 621 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 FKTNO75072 461 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 CERKLQ49MI3 558 aaPredicted RBP13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 MCMDC2Q4G0Z9 681 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 RUFY2Q8WXA3 655 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 LSG1Q9H089 658 aaKnown RBP13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 HELLSQ9NRZ9 838 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
TUBA1C-203ENST00000548470 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 C19orf81C9J6K1 198 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 BTBD19C9JJ37 291 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 FOXP2O15409 715 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 PLCD1P51178 756 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 GABPAQ06546 454 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 C12orf60Q5U649 245 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 PROCA1Q8NCQ7 364 aaPredicted RBP13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 CCDC17Q96LX7 622 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 ARPP21Q9UBL0 812 aaPredicted RBP13.96□□□□□ -0.17
TUBA1C-203ENST00000548470 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 FOCADQ5VW36 1801 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 USP17L21D6R901 530 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 PRKAB2O43741 272 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 TAF1CQ15572 869 aaPredicted RBP13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 FAM43AQ8N2R8 423 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
TUBA1C-203ENST00000548470 PCNTO95613 3336 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 PDHXO00330 501 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 TLR2O60603 784 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 SLURP2P0DP57 97 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 SPP2Q13103 211 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 CRHR2Q13324 411 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 MOGSQ13724 837 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 ZNF296Q8WUU4 475 aaPredicted RBP13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 LAMB1P07942 1786 aa13.94□□□□□ -0.18
TUBA1C-203ENST00000548470 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 REC8O95072 547 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 APPP05067 770 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 SHMT1P34896 483 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 BACE1P56817 501 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 SP3Q02447 781 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 GPAT2Q6NUI2 795 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 KIAA1211Q6ZU35 1233 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 EPB41L4AQ9HCS5 686 aaPredicted RBP13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 RBM8AQ9Y5S9 174 aaKnown RBP13.93□□□□□ -0.18
TUBA1C-203ENST00000548470 GH2P01242 217 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 SLC3A2P08195 630 aaKnown RBP13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 USP14P54578 494 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 TMEM179Q6ZVK1 233 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 C16orf86Q6ZW13 317 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 TAF6LQ9Y6J9 622 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 MYH1P12882 1939 aa13.92□□□□□ -0.18
TUBA1C-203ENST00000548470 GNRH1P01148 92 aa13.91□□□□□ -0.18
TUBA1C-203ENST00000548470 OSBPP22059 807 aa13.91□□□□□ -0.18
TUBA1C-203ENST00000548470 TDO2P48775 406 aa13.91□□□□□ -0.18
TUBA1C-203ENST00000548470 CDK8P49336 464 aa13.91□□□□□ -0.18
TUBA1C-203ENST00000548470 KIF22Q14807 665 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms