RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 KIF22Q14807 665 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 SH3D19Q5HYK7 790 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 TATDN1Q6P1N9 297 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 TTC6Q86TZ1 520 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 OTUD7AQ8TE49 926 aaPredicted RBP27.95■■■□□ 2.06
CACNB3-208ENST00000548279 TRIM47Q96LD4 638 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 AS3MTQ9HBK9 375 aa27.95■■■□□ 2.06
CACNB3-208ENST00000548279 DCP1AQ9NPI6 582 aaPredicted RBP27.95■■■□□ 2.06
CACNB3-208ENST00000548279 MGAMO43451 1857 aa27.94■■■□□ 2.06
CACNB3-208ENST00000548279 MTMR2Q13614 643 aa27.94■■■□□ 2.06
CACNB3-208ENST00000548279 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.94■■■□□ 2.06
CACNB3-208ENST00000548279 BAZ2AQ9UIF9 1905 aaKnown RBP27.93■■■□□ 2.06
CACNB3-208ENST00000548279 GH2P01242 217 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 CYP2D6P10635 497 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 SHMT1P34896 483 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 PSMC4P43686 418 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 GABPAQ06546 454 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 ARHGEF6Q15052 776 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 UBE3CQ15386 1083 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 ARMC5Q96C12 935 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 MCM9Q9NXL9 1143 aa27.93■■■□□ 2.06
CACNB3-208ENST00000548279 POLR3DP05423 398 aaPredicted RBP27.92■■■□□ 2.06
CACNB3-208ENST00000548279 BACE1P56817 501 aa27.92■■■□□ 2.06
CACNB3-208ENST00000548279 GINM1Q9NU53 330 aa27.92■■■□□ 2.06
CACNB3-208ENST00000548279 OSBPP22059 807 aa27.91■■■□□ 2.06
CACNB3-208ENST00000548279 PUS7LQ9H0K6 701 aaKnown RBP27.91■■■□□ 2.06
CACNB3-208ENST00000548279 CENPFP49454 3210 aa27.9■■■□□ 2.06
CACNB3-208ENST00000548279 SMIM22K7EJ46 135 aa27.9■■■□□ 2.06
CACNB3-208ENST00000548279 SMCR8Q8TEV9 937 aaPredicted RBP27.9■■■□□ 2.06
CACNB3-208ENST00000548279 GPATCH3Q96I76 525 aa27.9■■■□□ 2.06
CACNB3-208ENST00000548279 CERKLQ49MI3 558 aaPredicted RBP27.89■■■□□ 2.06
CACNB3-208ENST00000548279 KBTBD3Q8NAB2 608 aa27.89■■■□□ 2.06
CACNB3-208ENST00000548279 PI4K2BQ8TCG2 481 aa27.89■■■□□ 2.06
CACNB3-208ENST00000548279 ASCC2Q9H1I8 757 aaPredicted RBP27.89■■■□□ 2.06
CACNB3-208ENST00000548279 POTEFA5A3E0 1075 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 USP17L10C9JJH3 530 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 FMNL1O95466 1100 aaPredicted RBP27.88■■■□□ 2.05
CACNB3-208ENST00000548279 GNRH1P01148 92 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 GUCY1A2P33402 732 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 SLC44A5Q8NCS7 719 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 ZNF333Q96JL9 665 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 SRRDQ9UH36 339 aa27.88■■■□□ 2.05
CACNB3-208ENST00000548279 TNRC18O15417 2968 aaPredicted RBP27.88■■■□□ 2.05
CACNB3-208ENST00000548279 RBBP6Q7Z6E9 1792 aaKnown RBP27.88■■■□□ 2.05
CACNB3-208ENST00000548279 SLC9C1Q4G0N8 1177 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 ZSCAN25Q6NSZ9 544 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 ANKRD13CQ8N6S4 541 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 SH3TC2Q8TF17 1288 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 DYNLL2Q96FJ2 89 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 PNMA3Q9UL41 463 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 SALL3Q9BXA9 1300 aa27.87■■■□□ 2.05
CACNB3-208ENST00000548279 CYP2D7A0A087X1C5 515 aa27.86■■■□□ 2.05
CACNB3-208ENST00000548279 ABCB5Q2M3G0 1257 aa27.86■■■□□ 2.05
CACNB3-208ENST00000548279 EMILIN3Q9NT22 766 aa27.86■■■□□ 2.05
CACNB3-208ENST00000548279 ATP8A2Q9NTI2 1148 aa27.86■■■□□ 2.05
CACNB3-208ENST00000548279 TTC41PQ6P2S7 1318 aa27.86■■■□□ 2.05
CACNB3-208ENST00000548279 C19orf81C9J6K1 198 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 PRMT2P55345 433 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 FCGRTP55899 365 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 HDAC1Q13547 482 aaPredicted RBP27.85■■■□□ 2.05
CACNB3-208ENST00000548279 RAB3GAP1Q15042 981 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 TMOD4Q9NZQ9 345 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 GABRQQ9UN88 632 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 SLC4A4Q9Y6R1 1079 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 MYPNQ86TC9 1320 aa27.85■■■□□ 2.05
CACNB3-208ENST00000548279 PRKCZQ05513 592 aa27.84■■■□□ 2.05
CACNB3-208ENST00000548279 PABPC4Q13310 644 aaKnown RBP eCLIP27.84■■■□□ 2.05
CACNB3-208ENST00000548279 ACER1Q8TDN7 264 aa27.84■■■□□ 2.05
CACNB3-208ENST00000548279 OSBP2Q969R2 916 aa27.84■■■□□ 2.05
CACNB3-208ENST00000548279 MYH8P13535 1937 aa27.84■■■□□ 2.05
CACNB3-208ENST00000548279 PEX10O60683 326 aa27.83■■■□□ 2.05
CACNB3-208ENST00000548279 HOXA7P31268 230 aaPredicted RBP27.83■■■□□ 2.05
CACNB3-208ENST00000548279 ZYXQ15942 572 aaKnown RBP27.83■■■□□ 2.05
CACNB3-208ENST00000548279 FAM110CQ1W6H9 321 aa27.83■■■□□ 2.05
CACNB3-208ENST00000548279 ANKRD45Q5TZF3 282 aa27.83■■■□□ 2.05
CACNB3-208ENST00000548279 USP17L12C9JPN9 530 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 USP17L21D6R901 530 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 RNF113AO15541 343 aaKnown RBP27.82■■■□□ 2.04
CACNB3-208ENST00000548279 MX1P20591 662 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 SEPT2Q15019 361 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 C12orf60Q5U649 245 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 USP17L2Q6R6M4 530 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 STRBPQ96SI9 672 aaKnown RBP27.82■■■□□ 2.04
CACNB3-208ENST00000548279 CABP5Q9NP86 173 aa27.82■■■□□ 2.04
CACNB3-208ENST00000548279 MYCP01106 439 aaPredicted RBP27.81■■■□□ 2.04
CACNB3-208ENST00000548279 HOXD10P28358 340 aa27.81■■■□□ 2.04
CACNB3-208ENST00000548279 EXOC6Q8TAG9 804 aa27.81■■■□□ 2.04
CACNB3-208ENST00000548279 APPBP2Q92624 585 aa27.81■■■□□ 2.04
CACNB3-208ENST00000548279 C12orf42Q96LP6 360 aa27.81■■■□□ 2.04
CACNB3-208ENST00000548279 P2RX7Q99572 595 aaKnown RBP27.81■■■□□ 2.04
CACNB3-208ENST00000548279 M0R2C6 588 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 GLRX3O76003 335 aaKnown RBP27.8■■■□□ 2.04
CACNB3-208ENST00000548279 GCLCP48506 637 aaPredicted RBP27.8■■■□□ 2.04
CACNB3-208ENST00000548279 IRX3P78415 501 aaPredicted RBP27.8■■■□□ 2.04
CACNB3-208ENST00000548279 CTR9Q6PD62 1173 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 POTEEQ6S8J3 1075 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 NBPF11Q86T75 865 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 GCC1Q96CN9 775 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 FEZ1Q99689 392 aa27.8■■■□□ 2.04
CACNB3-208ENST00000548279 DOCK3Q8IZD9 2030 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms