RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 GPR108Q9NPR9 543 aa24.59■■□□□ 1.53
GATC-202ENST00000548171 PNMA6EA0A0J9YXQ4 647 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 USP17L10C9JJH3 530 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 TRIM27P14373 513 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 CYP2B6P20813 491 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 MNX1P50219 401 aaPredicted RBP24.58■■□□□ 1.53
GATC-202ENST00000548171 HERVK_113P62684 666 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 TRIM32Q13049 653 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 CCDC158Q5M9N0 1113 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 CRACR2BQ8N4Y2 399 aaPredicted RBP24.58■■□□□ 1.53
GATC-202ENST00000548171 SLC17A8Q8NDX2 589 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 LRCH3Q96II8 777 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 P2RX7Q99572 595 aaKnown RBP24.58■■□□□ 1.53
GATC-202ENST00000548171 MYH1P12882 1939 aa24.58■■□□□ 1.53
GATC-202ENST00000548171 FLT1P17948 1338 aa24.58■■□□□ 1.52
GATC-202ENST00000548171 PRKAR2AP13861 404 aaKnown RBP24.57■■□□□ 1.52
GATC-202ENST00000548171 MAPK4P31152 587 aa24.57■■□□□ 1.52
GATC-202ENST00000548171 PDE3AQ14432 1141 aa24.57■■□□□ 1.52
GATC-202ENST00000548171 TTC39AQ5SRH9 613 aa24.57■■□□□ 1.52
GATC-202ENST00000548171 ATF7IPQ6VMQ6 1270 aa24.57■■□□□ 1.52
GATC-202ENST00000548171 TGFBRAP1Q8WUH2 860 aa24.57■■□□□ 1.52
GATC-202ENST00000548171 MAPKAPK5Q8IW41 473 aa24.56■■□□□ 1.52
GATC-202ENST00000548171 DNAJC18Q9H819 358 aa24.56■■□□□ 1.52
GATC-202ENST00000548171 CCAR1Q8IX12 1150 aaKnown RBP24.55■■□□□ 1.52
GATC-202ENST00000548171 TXNRD2Q9NNW7 524 aa24.55■■□□□ 1.52
GATC-202ENST00000548171 SNRKQ9NRH2 765 aa24.55■■□□□ 1.52
GATC-202ENST00000548171 ZBTB21Q9ULJ3 1066 aa24.55■■□□□ 1.52
GATC-202ENST00000548171 ZMYND8Q9ULU4 1186 aaPredicted RBP24.55■■□□□ 1.52
GATC-202ENST00000548171 LAMA3Q16787 3333 aa24.55■■□□□ 1.52
GATC-202ENST00000548171 HLA-DOAP06340 250 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 ZKSCAN1P17029 563 aaPredicted RBP24.54■■□□□ 1.52
GATC-202ENST00000548171 JAG1P78504 1218 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 TNNI3KQ59H18 835 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 ADGRA1Q86SQ6 560 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 ZNF512BQ96KM6 892 aaPredicted RBP24.54■■□□□ 1.52
GATC-202ENST00000548171 RBPJLQ9UBG7 517 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 PALD1Q9ULE6 856 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 FPGT-TNNI3KV9GXZ4 949 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 FRMPD3Q5JV73 1810 aa24.54■■□□□ 1.52
GATC-202ENST00000548171 CYP2E1P05181 493 aaPredicted RBP24.53■■□□□ 1.52
GATC-202ENST00000548171 RGS2P41220 211 aa24.53■■□□□ 1.52
GATC-202ENST00000548171 ERVK-9P63128 1117 aa24.53■■□□□ 1.52
GATC-202ENST00000548171 ERVK-24P63145 666 aa24.53■■□□□ 1.52
GATC-202ENST00000548171 USP6NLQ92738 828 aa24.53■■□□□ 1.52
GATC-202ENST00000548171 DLL1O00548 723 aa24.52■■□□□ 1.52
GATC-202ENST00000548171 GDF11O95390 407 aa24.52■■□□□ 1.52
GATC-202ENST00000548171 LRIT3Q3SXY7 679 aa24.52■■□□□ 1.52
GATC-202ENST00000548171 USP17L2Q6R6M4 530 aa24.52■■□□□ 1.52
GATC-202ENST00000548171 FRAT1Q92837 279 aaPredicted RBP24.52■■□□□ 1.52
GATC-202ENST00000548171 DBNDD2Q9BQY9 259 aa24.52■■□□□ 1.52
GATC-202ENST00000548171 MAGEA10P43363 369 aaPredicted RBP24.51■■□□□ 1.51
GATC-202ENST00000548171 OS9Q13438 667 aaPredicted RBP24.51■■□□□ 1.51
GATC-202ENST00000548171 POLA2Q14181 598 aa24.51■■□□□ 1.51
GATC-202ENST00000548171 GPR142Q7Z601 462 aa24.51■■□□□ 1.51
GATC-202ENST00000548171 CERS3Q8IU89 383 aa24.51■■□□□ 1.51
GATC-202ENST00000548171 TDHQ8IZJ6 230 aa24.51■■□□□ 1.51
GATC-202ENST00000548171 PEX10O60683 326 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 COL6A1P12109 1028 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 SYN1P17600 705 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 CACNB2Q08289 660 aaPredicted RBP24.5■■□□□ 1.51
GATC-202ENST00000548171 Q3C1V9 767 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 MORN1Q5T089 497 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 PLEKHH3Q7Z736 793 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 SSH3Q8TE77 659 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 CLUAP1Q96AJ1 413 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 APBA2Q99767 749 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 EMILIN3Q9NT22 766 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 PFASO15067 1338 aa24.5■■□□□ 1.51
GATC-202ENST00000548171 SHROOM1Q2M3G4 852 aaPredicted RBP24.49■■□□□ 1.51
GATC-202ENST00000548171 C12orf42Q96LP6 360 aa24.49■■□□□ 1.51
GATC-202ENST00000548171 PAGR1Q9BTK6 254 aa24.49■■□□□ 1.51
GATC-202ENST00000548171 PORCNQ9H237 461 aa24.49■■□□□ 1.51
GATC-202ENST00000548171 SAP30BPQ9UHR5 308 aaKnown RBP24.49■■□□□ 1.51
GATC-202ENST00000548171 GLRX3O76003 335 aaKnown RBP24.48■■□□□ 1.51
GATC-202ENST00000548171 CCNA1P78396 465 aa24.48■■□□□ 1.51
GATC-202ENST00000548171 LHX8Q68G74 356 aa24.48■■□□□ 1.51
GATC-202ENST00000548171 DEFB123Q8N688 67 aa24.48■■□□□ 1.51
GATC-202ENST00000548171 UBE2OQ9C0C9 1292 aaKnown RBP24.48■■□□□ 1.51
GATC-202ENST00000548171 TNNQ9UQP3 1299 aa24.48■■□□□ 1.51
GATC-202ENST00000548171 RABGAP1Q9Y3P9 1069 aa24.48■■□□□ 1.51
GATC-202ENST00000548171 SURF6O75683 361 aaKnown RBP24.47■■□□□ 1.51
GATC-202ENST00000548171 BCAR3O75815 825 aa24.47■■□□□ 1.51
GATC-202ENST00000548171 GH2P01242 217 aa24.47■■□□□ 1.51
GATC-202ENST00000548171 ZAP70P43403 619 aa24.47■■□□□ 1.51
GATC-202ENST00000548171 ATP8B2P98198 1209 aa24.47■■□□□ 1.51
GATC-202ENST00000548171 TMED8Q6PL24 325 aaPredicted RBP24.47■■□□□ 1.51
GATC-202ENST00000548171 CWC22Q9HCG8 908 aaKnown RBP24.47■■□□□ 1.51
GATC-202ENST00000548171 PIH1D3Q9NQM4 214 aaKnown RBP24.47■■□□□ 1.51
GATC-202ENST00000548171 USP17L15C9J2P7 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L13C9JLJ4 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L11C9JVI0 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L18D6R9N7 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L22D6RA61 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L17D6RBQ6 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L19D6RCP7 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L20D6RJB6 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 CYP7A1P22680 504 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP14P54578 494 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 USP17L24Q0WX57 530 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 CCL14Q16627 93 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms