RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ORC4O43929 436 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 TBC1D12O60347 775 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 USP2O75604 605 aaPredicted RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 INPP5BP32019 993 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 MAP3K10Q02779 954 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 CLEC10AQ8IUN9 316 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 MB21D2Q8IYB1 491 aaPredicted RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 ZKSCAN4Q969J2 545 aaPredicted RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 TSPY2A6NKD2 308 aa20.26■□□□□ 0.83
KRT4-201ENST00000548097 ANTXR2P58335 489 aa20.26■□□□□ 0.83
KRT4-201ENST00000548097 ANAPC15P60006 121 aa20.26■□□□□ 0.83
KRT4-201ENST00000548097 TTLL12Q14166 644 aaPredicted RBP20.26■□□□□ 0.83
KRT4-201ENST00000548097 KRT32Q14532 448 aa20.26■□□□□ 0.83
KRT4-201ENST00000548097 CCDC84Q86UT8 332 aaPredicted RBP20.26■□□□□ 0.83
KRT4-201ENST00000548097 WRNIP1Q96S55 665 aa20.26■□□□□ 0.83
KRT4-201ENST00000548097 ANGEL1Q9UNK9 670 aaKnown RBP20.26■□□□□ 0.83
KRT4-201ENST00000548097 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 ESR2Q92731 530 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 ZNF341Q9BYN7 854 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 KRT23Q9C075 422 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 CNNM2Q9H8M5 875 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 GPHNQ9NQX3 736 aaPredicted RBP20.25■□□□□ 0.83
KRT4-201ENST00000548097 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
KRT4-201ENST00000548097 TSPY3P0CV98 308 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 TSPY8P0CW00 308 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 NF2P35240 595 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 KLRG1Q96E93 195 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.25■□□□□ 0.83
KRT4-201ENST00000548097 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
KRT4-201ENST00000548097 TOMM70O94826 608 aa20.24■□□□□ 0.83
KRT4-201ENST00000548097 GH2P01242 217 aa20.24■□□□□ 0.83
KRT4-201ENST00000548097 CST9Q5W186 159 aa20.24■□□□□ 0.83
KRT4-201ENST00000548097 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
KRT4-201ENST00000548097 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
KRT4-201ENST00000548097 PRC1O43663 620 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 PSMA5P28066 241 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 ABCB5Q2M3G0 1257 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 SMC1BQ8NDV3 1235 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
KRT4-201ENST00000548097 IL17RBQ9NRM6 502 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 PPP1R12BO60237 982 aaPredicted RBP20.23■□□□□ 0.83
KRT4-201ENST00000548097 PCP11498 1178 aaKnown RBP20.23■□□□□ 0.83
KRT4-201ENST00000548097 RPS6KB1P23443 525 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 CAP2P40123 477 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 SEPT2Q15019 361 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 SENP2Q9HC62 589 aa20.23■□□□□ 0.83
KRT4-201ENST00000548097 GUCY1A2P33402 732 aa20.22■□□□□ 0.83
KRT4-201ENST00000548097 NEK4P51957 841 aa20.22■□□□□ 0.83
KRT4-201ENST00000548097 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
KRT4-201ENST00000548097 DHX32Q7L7V1 743 aaKnown RBP20.22■□□□□ 0.83
KRT4-201ENST00000548097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.22■□□□□ 0.83
KRT4-201ENST00000548097 IL17RAQ96F46 866 aa20.22■□□□□ 0.83
KRT4-201ENST00000548097 ZNF112Q9UJU3 913 aa20.22■□□□□ 0.83
KRT4-201ENST00000548097 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 MCM5P33992 734 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
KRT4-201ENST00000548097 CLMNQ96JQ2 1002 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 CYP46A1Q9Y6A2 500 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 ATAD5Q96QE3 1844 aa20.21■□□□□ 0.83
KRT4-201ENST00000548097 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.2■□□□□ 0.82
KRT4-201ENST00000548097 NEDD1Q8NHV4 660 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
KRT4-201ENST00000548097 CHMP4CQ96CF2 233 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 CEP95Q96GE4 821 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 ZBTB21Q9ULJ3 1066 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 VGLL4Q14135 290 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 Q6ZUG5 572 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 CCDC17Q96LX7 622 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
KRT4-201ENST00000548097 GBA2Q9HCG7 927 aaPredicted RBP20.2■□□□□ 0.82
KRT4-201ENST00000548097 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 PDRG1Q9NUG6 133 aa20.2■□□□□ 0.82
KRT4-201ENST00000548097 TNKSO95271 1327 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 IFIT3O14879 490 aaKnown RBP20.19■□□□□ 0.82
KRT4-201ENST00000548097 CTNND1O60716 968 aaKnown RBP20.19■□□□□ 0.82
KRT4-201ENST00000548097 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
KRT4-201ENST00000548097 ATP2B2Q01814 1243 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 UBAC1Q9BSL1 405 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 CABP5Q9NP86 173 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 STX8Q9UNK0 236 aa20.19■□□□□ 0.82
KRT4-201ENST00000548097 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 CD2BP2O95400 341 aaKnown RBP20.18■□□□□ 0.82
KRT4-201ENST00000548097 HMGB1P09429 215 aaKnown RBP20.18■□□□□ 0.82
KRT4-201ENST00000548097 MAP3K9P80192 1104 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 ARMC9Q7Z3E5 817 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 ENAHQ8N8S7 591 aaPredicted RBP20.18■□□□□ 0.82
KRT4-201ENST00000548097 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 TRPM7Q96QT4 1865 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 GREB1LQ9C091 1923 aaPredicted RBP20.18■□□□□ 0.82
KRT4-201ENST00000548097 IGKV6D-41A0A0C4DH26 115 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 TMEM67Q5HYA8 995 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 TMEM179Q6ZVK1 233 aa20.18■□□□□ 0.82
KRT4-201ENST00000548097 IQCA1Q86XH1 822 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms