RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
SEC23A-204ENST00000548032 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
SEC23A-204ENST00000548032 GH2P01242 217 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 EVX2Q03828 476 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 KIF22Q14807 665 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 ARHGEF6Q15052 776 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 C17orf99Q6UX52 265 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 PI4K2BQ8TCG2 481 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 PUS7LQ9H0K6 701 aaKnown RBP17.46■□□□□ 0.39
SEC23A-204ENST00000548032 AGTPBP1Q9UPW5 1226 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
SEC23A-204ENST00000548032 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
SEC23A-204ENST00000548032 MTMR2Q13614 643 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 CERKLQ49MI3 558 aaPredicted RBP17.45■□□□□ 0.38
SEC23A-204ENST00000548032 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 DDRGK1Q96HY6 314 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 RWDD1Q9H446 243 aaPredicted RBP17.45■□□□□ 0.38
SEC23A-204ENST00000548032 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 ADGRA2Q96PE1 1338 aa17.45■□□□□ 0.38
SEC23A-204ENST00000548032 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
SEC23A-204ENST00000548032 SHMT1P34896 483 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 ABCB5Q2M3G0 1257 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 PROCA1Q8NCQ7 364 aaPredicted RBP17.44■□□□□ 0.38
SEC23A-204ENST00000548032 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
SEC23A-204ENST00000548032 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 TMOD4Q9NZQ9 345 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 PTPN22Q9Y2R2 807 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 SLC45A1Q9Y2W3 748 aa17.44■□□□□ 0.38
SEC23A-204ENST00000548032 MYH1P12882 1939 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 BACE1P56817 501 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
SEC23A-204ENST00000548032 AMOTL1Q8IY63 956 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 APPBP2Q92624 585 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 FSD1Q9BTV5 496 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 LNPKQ9C0E8 428 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 PNMA3Q9UL41 463 aa17.43■□□□□ 0.38
SEC23A-204ENST00000548032 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 NAV1Q8NEY1 1877 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
SEC23A-204ENST00000548032 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
SEC23A-204ENST00000548032 IGHDP01880 384 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
SEC23A-204ENST00000548032 GABPAQ06546 454 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 PABPC4Q13310 644 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEC23A-204ENST00000548032 LRRFIP1Q32MZ4 808 aaKnown RBP17.42■□□□□ 0.38
SEC23A-204ENST00000548032 SH3D19Q5HYK7 790 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 OSBP2Q969R2 916 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 DYNLL2Q96FJ2 89 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 FEZ1Q99689 392 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 ATAD5Q96QE3 1844 aa17.42■□□□□ 0.38
SEC23A-204ENST00000548032 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
SEC23A-204ENST00000548032 USP17L21D6R901 530 aa17.41■□□□□ 0.38
SEC23A-204ENST00000548032 OSBPP22059 807 aa17.41■□□□□ 0.38
SEC23A-204ENST00000548032 PSMC4P43686 418 aa17.41■□□□□ 0.38
SEC23A-204ENST00000548032 ZYXQ15942 572 aaKnown RBP17.41■□□□□ 0.38
SEC23A-204ENST00000548032 PRPF38BQ5VTL8 546 aaKnown RBP17.41■□□□□ 0.38
SEC23A-204ENST00000548032 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
SEC23A-204ENST00000548032 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
SEC23A-204ENST00000548032 DDX60LQ5H9U9 1706 aaKnown RBP17.41■□□□□ 0.38
SEC23A-204ENST00000548032 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 SMIM22K7EJ46 135 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 M0R2C6 588 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 GPAA1O43292 621 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 BCRP11274 1271 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 CTGFP29279 349 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 ANKRD13CQ8N6S4 541 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 TRIM47Q96LD4 638 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 SWAP70Q9UH65 585 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
SEC23A-204ENST00000548032 PDE1AP54750 535 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 IRX3P78415 501 aaPredicted RBP17.39■□□□□ 0.37
SEC23A-204ENST00000548032 SEPT2Q15019 361 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 C12orf60Q5U649 245 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 USP17L2Q6R6M4 530 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
SEC23A-204ENST00000548032 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
SEC23A-204ENST00000548032 APPP05067 770 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 GUCY1A2P33402 732 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 FCGRTP55899 365 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
SEC23A-204ENST00000548032 EMILIN3Q9NT22 766 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
SEC23A-204ENST00000548032 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 PTPRFP10586 1907 aa17.38■□□□□ 0.37
SEC23A-204ENST00000548032 MYH7P12883 1935 aa17.37■□□□□ 0.37
SEC23A-204ENST00000548032 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
SEC23A-204ENST00000548032 MINDY4BA8MYZ0 360 aa17.37■□□□□ 0.37
SEC23A-204ENST00000548032 GNRH1P01148 92 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms