RNA–Protein interactions for RNA: ENST00000547955.5

TPCN1-210, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-210ENST00000547955 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
TPCN1-210ENST00000547955 RASA1P20936 1047 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 ANAPC15P60006 121 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
TPCN1-210ENST00000547955 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
TPCN1-210ENST00000547955 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
TPCN1-210ENST00000547955 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 MOB2Q70IA6 237 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
TPCN1-210ENST00000547955 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 NEK1Q96PY6 1258 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 KRT23Q9C075 422 aa13.21□□□□□ -0.29
TPCN1-210ENST00000547955 ORC4O43929 436 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
TPCN1-210ENST00000547955 FGRP09769 529 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 PCP11498 1178 aaKnown RBP13.2□□□□□ -0.3
TPCN1-210ENST00000547955 AKR1B1P15121 316 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 TFAP4Q01664 338 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
TPCN1-210ENST00000547955 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 CHST3Q7LGC8 479 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 ESR2Q92731 530 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 ZKSCAN3Q9BRR0 538 aa13.2□□□□□ -0.3
TPCN1-210ENST00000547955 UPF3BQ9BZI7 483 aaKnown RBP13.2□□□□□ -0.3
TPCN1-210ENST00000547955 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
TPCN1-210ENST00000547955 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 TOMM70O94826 608 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 PSMA5P28066 241 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 INPP5BP32019 993 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 ABCB5Q2M3G0 1257 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
TPCN1-210ENST00000547955 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.19□□□□□ -0.3
TPCN1-210ENST00000547955 PRC1O43663 620 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 NMT2O60551 498 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 GH2P01242 217 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 IREB2P48200 963 aaKnown RBP13.18□□□□□ -0.3
TPCN1-210ENST00000547955 JAG1P78504 1218 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
TPCN1-210ENST00000547955 KLRG1Q96E93 195 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 KIF2CQ99661 725 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 ZSWIM5Q9P217 1185 aa13.18□□□□□ -0.3
TPCN1-210ENST00000547955 PTPRFP10586 1907 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
TPCN1-210ENST00000547955 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 MCM5P33992 734 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 ANTXR2P58335 489 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 SEPT2Q15019 361 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
TPCN1-210ENST00000547955 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
TPCN1-210ENST00000547955 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
TPCN1-210ENST00000547955 TNKSO95271 1327 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
TPCN1-210ENST00000547955 CTNND1O60716 968 aaKnown RBP13.16□□□□□ -0.3
TPCN1-210ENST00000547955 CAP2P40123 477 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 NEK4P51957 841 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 FGD1P98174 961 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 CST9Q5W186 159 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
TPCN1-210ENST00000547955 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
TPCN1-210ENST00000547955 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 C2orf69Q8N8R5 385 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 CSADQ9Y600 493 aa13.16□□□□□ -0.3
TPCN1-210ENST00000547955 ERICH2A1L162 156 aa13.15□□□□□ -0.3
TPCN1-210ENST00000547955 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
TPCN1-210ENST00000547955 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
TPCN1-210ENST00000547955 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
TPCN1-210ENST00000547955 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms