RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 IDH1O75874 414 aaKnown RBP28.15■■■□□ 2.1
SMARCD1-204ENST00000547637 ERC1Q8IUD2 1116 aa28.15■■■□□ 2.1
SMARCD1-204ENST00000547637 HMX1Q9NP08 348 aaPredicted RBP28.15■■■□□ 2.1
SMARCD1-204ENST00000547637 MORF4L1Q9UBU8 362 aa28.15■■■□□ 2.1
SMARCD1-204ENST00000547637 MAST2Q6P0Q8 1798 aa28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 ZBTB7BO15156 539 aaPredicted RBP28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 USP5P45974 858 aa28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 GPRC5AQ8NFJ5 357 aa28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 CCDC8Q9H0W5 538 aaPredicted RBP28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 DBNLQ9UJU6 430 aaKnown RBP28.14■■■□□ 2.1
SMARCD1-204ENST00000547637 MAP3K12Q12852 859 aa28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 NECAB2Q7Z6G3 386 aa28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 ADGRA1Q86SQ6 560 aa28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 ANKLE1Q8NAG6 615 aa28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 PIH1D3Q9NQM4 214 aaKnown RBP28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 SAP30BPQ9UHR5 308 aaKnown RBP28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 RPTORQ8N122 1335 aa28.13■■■□□ 2.09
SMARCD1-204ENST00000547637 GDF11O95390 407 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 PDE3AQ14432 1141 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 NUDT12Q9BQG2 462 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 CRISPLD2Q9H0B8 497 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 RBM27Q9P2N5 1060 aaKnown RBP28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 GJD2Q9UKL4 321 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 ZBTB21Q9ULJ3 1066 aa28.12■■■□□ 2.09
SMARCD1-204ENST00000547637 TRIOBPQ9H2D6 2365 aa28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 HSP90AB4PQ58FF6 505 aa28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 USP17L2Q6R6M4 530 aa28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 TTC6Q86TZ1 520 aa28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 TRMT44Q8IYL2 757 aaKnown RBP28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 SOCS4Q8WXH5 440 aa28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 EAF2Q96CJ1 260 aaPredicted RBP28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 P2RX7Q99572 595 aaKnown RBP28.11■■■□□ 2.09
SMARCD1-204ENST00000547637 MAPK4P31152 587 aa28.1■■■□□ 2.09
SMARCD1-204ENST00000547637 HERVK_113P62684 666 aa28.1■■■□□ 2.09
SMARCD1-204ENST00000547637 DNAJC18Q9H819 358 aa28.1■■■□□ 2.09
SMARCD1-204ENST00000547637 CWC22Q9HCG8 908 aaKnown RBP28.1■■■□□ 2.09
SMARCD1-204ENST00000547637 DYNLL1P63167 89 aaKnown RBP28.09■■■□□ 2.09
SMARCD1-204ENST00000547637 MAGEB6Q8N7X4 407 aa28.09■■■□□ 2.09
SMARCD1-204ENST00000547637 PAWRQ96IZ0 340 aaKnown RBP28.09■■■□□ 2.09
SMARCD1-204ENST00000547637 SERPINB13Q9UIV8 391 aa28.09■■■□□ 2.09
SMARCD1-204ENST00000547637 FOCADQ5VW36 1801 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 MS4A1P11836 297 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 CYP2B6P20813 491 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 MIGA1Q8NAN2 632 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 FEZ1Q99689 392 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 CABP5Q9NP86 173 aa28.08■■■□□ 2.09
SMARCD1-204ENST00000547637 XRCC5P13010 732 aaKnown RBP28.07■■■□□ 2.08
SMARCD1-204ENST00000547637 USP14P54578 494 aa28.07■■■□□ 2.08
SMARCD1-204ENST00000547637 TTF1Q15361 905 aaPredicted RBP28.07■■■□□ 2.08
SMARCD1-204ENST00000547637 AACSQ86V21 672 aa28.07■■■□□ 2.08
SMARCD1-204ENST00000547637 TLR7Q9NYK1 1049 aaKnown RBP28.07■■■□□ 2.08
SMARCD1-204ENST00000547637 CDK5RAP2Q96SN8 1893 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 A0A1W2PPC1 479 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 GH2P01242 217 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 CEP85Q6P2H3 762 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 NBPF3Q9H094 633 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 EHD4Q9H223 541 aa28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 MYO5AQ9Y4I1 1855 aaKnown RBP28.06■■■□□ 2.08
SMARCD1-204ENST00000547637 SIPA1L1O43166 1804 aa28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 GLRX3O76003 335 aaKnown RBP28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 RLBP1P12271 317 aa28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 MYH1P12882 1939 aa28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 CCNA1P78396 465 aa28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 JAG1P78504 1218 aa28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 CERKLQ49MI3 558 aaPredicted RBP28.05■■■□□ 2.08
SMARCD1-204ENST00000547637 ERVK-9P63128 1117 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 ERVK-24P63145 666 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 TATDN1Q6P1N9 297 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 PAGR1Q9BTK6 254 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 EMILIN3Q9NT22 766 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 RBPJLQ9UBG7 517 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 EXOC6BQ9Y2D4 811 aa28.04■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L15C9J2P7 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L13C9JLJ4 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L11C9JVI0 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L18D6R9N7 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L22D6RA61 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L17D6RBQ6 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L19D6RCP7 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L20D6RJB6 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 ZKSCAN1P17029 563 aaPredicted RBP28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 RGS2P41220 211 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 USP17L24Q0WX57 530 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 RAB3GAP1Q15042 981 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 TRIB2Q92519 343 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 TXNRD2Q9NNW7 524 aa28.03■■■□□ 2.08
SMARCD1-204ENST00000547637 POLR3DP05423 398 aaPredicted RBP28.02■■■□□ 2.08
SMARCD1-204ENST00000547637 ABCB5Q2M3G0 1257 aa28.02■■■□□ 2.08
SMARCD1-204ENST00000547637 PLEKHH3Q7Z736 793 aa28.02■■■□□ 2.08
SMARCD1-204ENST00000547637 CLASRPQ8N2M8 674 aaKnown RBP28.02■■■□□ 2.08
SMARCD1-204ENST00000547637 PRKAR2AP13861 404 aaKnown RBP28.01■■■□□ 2.07
SMARCD1-204ENST00000547637 C12orf42Q96LP6 360 aa28.01■■■□□ 2.07
SMARCD1-204ENST00000547637 RABGAP1Q9Y3P9 1069 aa28.01■■■□□ 2.07
SMARCD1-204ENST00000547637 MAGEB6P1A0A0J9YX57 407 aa28■■■□□ 2.07
SMARCD1-204ENST00000547637 ZYXQ15942 572 aaKnown RBP28■■■□□ 2.07
SMARCD1-204ENST00000547637 Q3C1V9 767 aa28■■■□□ 2.07
SMARCD1-204ENST00000547637 GPR142Q7Z601 462 aa28■■■□□ 2.07
SMARCD1-204ENST00000547637 PRO3102Q9H379 93 aa28■■■□□ 2.07
SMARCD1-204ENST00000547637 C11orf49Q9H6J7 331 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms