RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ATG9AQ7Z3C6 839 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 RNF135Q8IUD6 432 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 VGLL2Q8N8G2 317 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 ANKRD2Q9GZV1 360 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 PODXL2Q9NZ53 605 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 GGA1Q9UJY5 639 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
PRKDC-211ENST00000546304 DOLKQ9UPQ8 538 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 RIPOR2Q9Y4F9 1068 aa7.82□□□□□ -1.16
PRKDC-211ENST00000546304 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 SURF6O75683 361 aaKnown RBP7.81□□□□□ -1.16
PRKDC-211ENST00000546304 GNRH1P01148 92 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 KCNJ4P48050 445 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 PUM3Q15397 648 aaKnown RBP7.81□□□□□ -1.16
PRKDC-211ENST00000546304 ARHGAP27Q6ZUM4 889 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 SUPT20HQ8NEM7 779 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 TBC1D16Q8TBP0 767 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 RTFDC1Q9BY42 306 aaPredicted RBP7.81□□□□□ -1.16
PRKDC-211ENST00000546304 ALG2Q9H553 416 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 ZNF277Q9NRM2 450 aaPredicted RBP7.81□□□□□ -1.16
PRKDC-211ENST00000546304 EXOC6BQ9Y2D4 811 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 MAST2Q6P0Q8 1798 aa7.81□□□□□ -1.16
PRKDC-211ENST00000546304 ZNF804BA4D1E1 1349 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 PPIP5K2O43314 1243 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 TAF5LO75529 589 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 PDE8BO95263 885 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 LMNB1P20700 586 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 ATP2B4P23634 1241 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 KLRK1P26718 216 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 IARSP41252 1262 aaKnown RBP7.8□□□□□ -1.16
PRKDC-211ENST00000546304 KIAA2012Q0VF49 1180 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 USP4Q13107 963 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.163e-8■■■■□ 25.2
PRKDC-211ENST00000546304 HDAC1Q13547 482 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-211ENST00000546304 AOC3Q16853 763 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 HSP90AB4PQ58FF6 505 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 LYSMD3Q7Z3D4 306 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 ERC1Q8IUD2 1116 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 HOMEZQ8IX15 550 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 GPR101Q96P66 508 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-211ENST00000546304 EYA3Q99504 573 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 POLLQ9UGP5 575 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 NOP58Q9Y2X3 529 aaKnown RBP7.8□□□□□ -1.16
PRKDC-211ENST00000546304 AKAP11Q9UKA4 1901 aa7.8□□□□□ -1.16
PRKDC-211ENST00000546304 IRS2Q9Y4H2 1338 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 SNAP23O00161 211 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 MEN1O00255 615 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 SLC5A1P13866 664 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 GMPRP36959 345 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 PRELPP51888 382 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 TFCP2Q12800 502 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 UBE4AQ14139 1066 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 ATP2B3Q16720 1220 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 RNF181Q9P0P0 153 aa7.79□□□□□ -1.16
PRKDC-211ENST00000546304 COL1A1P02452 1464 aaPredicted RBP7.79□□□□□ -1.16
PRKDC-211ENST00000546304 DOCK2Q92608 1830 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 MYH7P12883 1935 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 A0A1B0GUL7 405 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
PRKDC-211ENST00000546304 SASH1O94885 1247 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 IFIT1P09914 478 aaKnown RBP7.78□□□□□ -1.16
PRKDC-211ENST00000546304 FGFR2P21802 821 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 C15orf52Q6ZUT6 534 aaKnown RBP7.78□□□□□ -1.16
PRKDC-211ENST00000546304 NIM1KQ8IY84 436 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 NANOS1Q8WY41 292 aaKnown RBP7.78□□□□□ -1.16
PRKDC-211ENST00000546304 LPIN2Q92539 896 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 KIF1BPQ96EK5 621 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 ARHGEF10LQ9HCE6 1279 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.78□□□□□ -1.16
PRKDC-211ENST00000546304 AK9Q5TCS8 1911 aa7.78□□□□□ -1.16
PRKDC-211ENST00000546304 MYO5AQ9Y4I1 1855 aaKnown RBP7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ADAMTSL1Q8N6G6 1762 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ECE2O60344 883 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 RAB11FIP3O75154 756 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ADORA1P30542 326 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 INSM1Q01101 510 aaPredicted RBP7.77□□□□□ -1.17
PRKDC-211ENST00000546304 TNNI3KQ59H18 835 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ZNF804AQ7Z570 1209 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 RHPN1Q8TCX5 695 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ESYT1Q9BSJ8 1104 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
PRKDC-211ENST00000546304 GRIP2Q9C0E4 1043 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 VPS33BQ9H267 617 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 RWDD1Q9H446 243 aaPredicted RBP7.77□□□□□ -1.17
PRKDC-211ENST00000546304 DCTPP1Q9H773 170 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 IL1RAPL2Q9NP60 686 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 GPR108Q9NPR9 543 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 AKAP2Q9Y2D5 859 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 HRH3Q9Y5N1 445 aa7.77□□□□□ -1.17
PRKDC-211ENST00000546304 FPGT-TNNI3KV9GXZ4 949 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms