RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PICK1Q9NRD5 415 aa24.42■■□□□ 1.5
HMGA2-211ENST00000545998 GDF11O95390 407 aa24.41■■□□□ 1.5
HMGA2-211ENST00000545998 PTPRAP18433 802 aa24.41■■□□□ 1.5
HMGA2-211ENST00000545998 PPARAQ07869 468 aa24.41■■□□□ 1.5
HMGA2-211ENST00000545998 SHROOM1Q2M3G4 852 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-211ENST00000545998 CERKLQ49MI3 558 aaPredicted RBP24.41■■□□□ 1.5
HMGA2-211ENST00000545998 OTUD5Q96G74 571 aa24.41■■□□□ 1.5
HMGA2-211ENST00000545998 ZIC5Q96T25 663 aa24.41■■□□□ 1.5
HMGA2-211ENST00000545998 LAMA4Q16363 1823 aa24.4■■□□□ 1.5
HMGA2-211ENST00000545998 MAP2K2P36507 400 aa24.4■■□□□ 1.5
HMGA2-211ENST00000545998 PPATQ06203 517 aa24.4■■□□□ 1.5
HMGA2-211ENST00000545998 MKRN3Q13064 507 aaKnown RBP24.4■■□□□ 1.5
HMGA2-211ENST00000545998 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.4■■□□□ 1.5
HMGA2-211ENST00000545998 ANAPC4Q9UJX5 808 aa24.4■■□□□ 1.5
HMGA2-211ENST00000545998 GINM1Q9NU53 330 aa24.39■■□□□ 1.5
HMGA2-211ENST00000545998 ASNSP08243 561 aa24.38■■□□□ 1.49
HMGA2-211ENST00000545998 PPIL2Q13356 520 aa24.38■■□□□ 1.49
HMGA2-211ENST00000545998 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
HMGA2-211ENST00000545998 GH2P01242 217 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 KIF23Q02241 960 aaPredicted RBP24.37■■□□□ 1.49
HMGA2-211ENST00000545998 PTH1RQ03431 593 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 ABCB5Q2M3G0 1257 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 CASC1Q6TDU7 716 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 STK11IPQ8N1F8 1099 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 IRF6O14896 467 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 ZHX2Q9Y6X8 837 aa24.37■■□□□ 1.49
HMGA2-211ENST00000545998 PTPRFP10586 1907 aa24.36■■□□□ 1.49
HMGA2-211ENST00000545998 SLC3A2P08195 630 aaKnown RBP24.36■■□□□ 1.49
HMGA2-211ENST00000545998 CTDSPL2Q05D32 466 aa24.36■■□□□ 1.49
HMGA2-211ENST00000545998 CCDC84Q86UT8 332 aaPredicted RBP24.36■■□□□ 1.49
HMGA2-211ENST00000545998 JMYQ8N9B5 988 aa24.36■■□□□ 1.49
HMGA2-211ENST00000545998 MKNK2Q9HBH9 465 aa24.36■■□□□ 1.49
HMGA2-211ENST00000545998 AFG3L2Q9Y4W6 797 aa24.36■■□□□ 1.49
HMGA2-211ENST00000545998 USP17L5A8MUK1 530 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 RASA1P20936 1047 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 MS4A4AQ96JQ5 239 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 CCDC17Q96LX7 622 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 ZNF287Q9HBT7 754 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 KCNH4Q9UQ05 1017 aa24.35■■□□□ 1.49
HMGA2-211ENST00000545998 GREB1LQ9C091 1923 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-211ENST00000545998 AKR1B1P15121 316 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 HAND2P61296 217 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 PDE4BQ07343 736 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 TBC1D2Q9BYX2 928 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 NBPF3Q9H094 633 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 CABP5Q9NP86 173 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 CTNNA3Q9UI47 895 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.34■■□□□ 1.49
HMGA2-211ENST00000545998 TACC3Q9Y6A5 838 aa24.34■■□□□ 1.49
HMGA2-211ENST00000545998 MANSC4A6NHS7 340 aaPredicted RBP24.33■■□□□ 1.49
HMGA2-211ENST00000545998 PRDM1O75626 825 aa24.33■■□□□ 1.49
HMGA2-211ENST00000545998 GUCY1A2P33402 732 aa24.33■■□□□ 1.49
HMGA2-211ENST00000545998 MAP4K1Q92918 833 aa24.33■■□□□ 1.49
HMGA2-211ENST00000545998 LSG1Q9H089 658 aaKnown RBP24.33■■□□□ 1.49
HMGA2-211ENST00000545998 MPHOSPH10O00566 681 aaKnown RBP24.33■■□□□ 1.48
HMGA2-211ENST00000545998 ZNF213O14771 459 aa24.33■■□□□ 1.48
HMGA2-211ENST00000545998 FGRP09769 529 aa24.33■■□□□ 1.48
HMGA2-211ENST00000545998 GTF2A2P52657 109 aa24.33■■□□□ 1.48
HMGA2-211ENST00000545998 KIAA1211Q6ZU35 1233 aa24.33■■□□□ 1.48
HMGA2-211ENST00000545998 REM2Q8IYK8 340 aaPredicted RBP24.33■■□□□ 1.48
HMGA2-211ENST00000545998 INCENPQ9NQS7 918 aa24.33■■□□□ 1.48
HMGA2-211ENST00000545998 CXCL11O14625 94 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 TM4SF4P48230 202 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 SNAPC2Q13487 334 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 RAB3GAP1Q15042 981 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 TMEM179Q6ZVK1 233 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 ZNF280CQ8ND82 737 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 WDR18Q9BV38 432 aa24.32■■□□□ 1.48
HMGA2-211ENST00000545998 U3KPZ7 1027 aaPredicted RBP24.32■■□□□ 1.48
HMGA2-211ENST00000545998 TESPA1A2RU30 521 aaPredicted RBP24.31■■□□□ 1.48
HMGA2-211ENST00000545998 INHBEP58166 350 aa24.31■■□□□ 1.48
HMGA2-211ENST00000545998 SREBF2Q12772 1141 aa24.31■■□□□ 1.48
HMGA2-211ENST00000545998 SEPT2Q15019 361 aa24.31■■□□□ 1.48
HMGA2-211ENST00000545998 IMMTQ16891 758 aaKnown RBP24.31■■□□□ 1.48
HMGA2-211ENST00000545998 TBC1D10CQ8IV04 446 aa24.31■■□□□ 1.48
HMGA2-211ENST00000545998 ZNF444Q8N0Y2 327 aaPredicted RBP24.31■■□□□ 1.48
HMGA2-211ENST00000545998 AS3MTQ9HBK9 375 aa24.31■■□□□ 1.48
HMGA2-211ENST00000545998 TRIM75PA6NK02 468 aa24.3■■□□□ 1.48
HMGA2-211ENST00000545998 ORC4O43929 436 aa24.3■■□□□ 1.48
HMGA2-211ENST00000545998 SPP2Q13103 211 aa24.3■■□□□ 1.48
HMGA2-211ENST00000545998 STAG1Q8WVM7 1258 aa24.3■■□□□ 1.48
HMGA2-211ENST00000545998 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
HMGA2-211ENST00000545998 ANO2Q9NQ90 1003 aa24.3■■□□□ 1.48
HMGA2-211ENST00000545998 CCL15-CCL14A0A0B4J2E2 113 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 CETPP11597 493 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 MAP2K1Q02750 393 aaPredicted RBP24.29■■□□□ 1.48
HMGA2-211ENST00000545998 CCL15Q16663 113 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 AKNAD1Q5T1N1 836 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 BRI3BPQ8WY22 251 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 A0A0G2JLL6 359 aaPredicted RBP24.29■■□□□ 1.48
HMGA2-211ENST00000545998 PCP11498 1178 aaKnown RBP24.29■■□□□ 1.48
HMGA2-211ENST00000545998 MOGSQ13724 837 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 PRRT2Q7Z6L0 340 aaPredicted RBP24.29■■□□□ 1.48
HMGA2-211ENST00000545998 PTPN18Q99952 460 aa24.29■■□□□ 1.48
HMGA2-211ENST00000545998 RBM8AQ9Y5S9 174 aaKnown RBP24.29■■□□□ 1.48
HMGA2-211ENST00000545998 MFSD6Q6ZSS7 791 aa24.28■■□□□ 1.48
HMGA2-211ENST00000545998 PLIN4Q96Q06 1357 aa24.28■■□□□ 1.48
HMGA2-211ENST00000545998 LOC285556D6RIA3 1793 aa24.27■■□□□ 1.48
HMGA2-211ENST00000545998 BACE1P56817 501 aa24.27■■□□□ 1.48
HMGA2-211ENST00000545998 FAM47AQ5JRC9 791 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms