RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	DPF3	Q92784	378 aa		29.03	■■■□□ 2.24
RAP1B-233	ENST00000545720	WDR18	Q9BV38	432 aa		29.03	■■■□□ 2.24
RAP1B-233	ENST00000545720	COLQ	Q9Y215	455 aa	Predicted RBP	29.03	■■■□□ 2.24
RAP1B-233	ENST00000545720	NAV1	Q8NEY1	1877 aa		29.03	■■■□□ 2.24
RAP1B-233	ENST00000545720	ZBED9	Q6R2W3	1325 aa		29.02	■■■□□ 2.24
RAP1B-233	ENST00000545720	UBE2Q1	Q7Z7E8	422 aa		29.02	■■■□□ 2.24
RAP1B-233	ENST00000545720	METTL16	Q86W50	562 aa	Known RBP	29.02	■■■□□ 2.24
RAP1B-233	ENST00000545720	MIGA1	Q8NAN2	632 aa		29.02	■■■□□ 2.24
RAP1B-233	ENST00000545720	HLA-DOA	P06340	250 aa		29.01	■■■□□ 2.23
RAP1B-233	ENST00000545720	BACE1	P56817	501 aa		29.01	■■■□□ 2.23
RAP1B-233	ENST00000545720	AACS	Q86V21	672 aa		29.01	■■■□□ 2.23
RAP1B-233	ENST00000545720	MAGEB6	Q8N7X4	407 aa		29.01	■■■□□ 2.23
RAP1B-233	ENST00000545720	TMOD4	Q9NZQ9	345 aa		29.01	■■■□□ 2.23
RAP1B-233	ENST00000545720	FARP2	O94887	1054 aa	Predicted RBP	29	■■■□□ 2.23
RAP1B-233	ENST00000545720	IRX3	P78415	501 aa	Predicted RBP	29	■■■□□ 2.23
RAP1B-233	ENST00000545720	ZBTB21	Q9ULJ3	1066 aa		29	■■■□□ 2.23
RAP1B-233	ENST00000545720	DDX60L	Q5H9U9	1706 aa	Known RBP	29	■■■□□ 2.23
RAP1B-233	ENST00000545720	ALPK3	Q96L96	1907 aa		28.99	■■■□□ 2.23
RAP1B-233	ENST00000545720	SGPL1	O95470	568 aa		28.99	■■■□□ 2.23
RAP1B-233	ENST00000545720	ERC1	Q8IUD2	1116 aa		28.99	■■■□□ 2.23
RAP1B-233	ENST00000545720	ANTXR1	Q9H6X2	564 aa		28.99	■■■□□ 2.23
RAP1B-233	ENST00000545720	USP5	P45974	858 aa		28.98	■■■□□ 2.23
RAP1B-233	ENST00000545720	DEFB118	Q96PH6	123 aa		28.98	■■■□□ 2.23
RAP1B-233	ENST00000545720	HTATIP2	Q9BUP3	242 aa		28.98	■■■□□ 2.23
RAP1B-233	ENST00000545720	FXR1	P51114	621 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
RAP1B-233	ENST00000545720	GINM1	Q9NU53	330 aa		28.97	■■■□□ 2.23
RAP1B-233	ENST00000545720	MYH8	P13535	1937 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	C19orf81	C9J6K1	198 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	USP17L10	C9JJH3	530 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	MAP3K12	Q12852	859 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	CERS3	Q8IU89	383 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	IL1RAPL2	Q9NP60	686 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	PAK6	Q9NQU5	681 aa	Predicted RBP	28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	MORF4L1	Q9UBU8	362 aa		28.96	■■■□□ 2.23
RAP1B-233	ENST00000545720	TFRC	P02786	760 aa	Known RBP	28.95	■■■□□ 2.22
RAP1B-233	ENST00000545720	HOXA7	P31268	230 aa	Predicted RBP	28.95	■■■□□ 2.22
RAP1B-233	ENST00000545720	P2RX7	Q99572	595 aa	Known RBP	28.95	■■■□□ 2.22
RAP1B-233	ENST00000545720	PEX10	O60683	326 aa		28.94	■■■□□ 2.22
RAP1B-233	ENST00000545720	GH2	P01242	217 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	HMGCR	P04035	888 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	HERVK_113	P62684	666 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	HSP90AB4P	Q58FF6	505 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	CHRDL2	Q6WN34	429 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.93	■■■□□ 2.22	8e-42	■■■■■ 28.4
RAP1B-233	ENST00000545720	TXNRD2	Q9NNW7	524 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	GJD2	Q9UKL4	321 aa		28.93	■■■□□ 2.22
RAP1B-233	ENST00000545720	RHPN1	Q8TCX5	695 aa		28.92	■■■□□ 2.22
RAP1B-233	ENST00000545720	SERPINB13	Q9UIV8	391 aa		28.92	■■■□□ 2.22
RAP1B-233	ENST00000545720	MYH7	P12883	1935 aa		28.92	■■■□□ 2.22
RAP1B-233	ENST00000545720	APBB1	O00213	710 aa		28.91	■■■□□ 2.22
RAP1B-233	ENST00000545720	TATDN1	Q6P1N9	297 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	USP17L2	Q6R6M4	530 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	GPRC5A	Q8NFJ5	357 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	FEZ1	Q99689	392 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	CRISPLD2	Q9H0B8	497 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	EHD4	Q9H223	541 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	EMILIN3	Q9NT22	766 aa		28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	RANBP2	P49792	3224 aa	Known RBP	28.9	■■■□□ 2.22
RAP1B-233	ENST00000545720	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	MS4A1	P11836	297 aa		28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	TRIM32	Q13049	653 aa		28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	ZYX	Q15942	572 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	TMED8	Q6PL24	325 aa	Predicted RBP	28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	RIOK1	Q9BRS2	568 aa	Known RBP	28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	BCL11A	Q9H165	835 aa		28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	NR2E3	Q9Y5X4	410 aa		28.89	■■■□□ 2.22
RAP1B-233	ENST00000545720	CYP2B6	P20813	491 aa		28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	TTF1	Q15361	905 aa	Predicted RBP	28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	TTC6	Q86TZ1	520 aa		28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	TRIB2	Q92519	343 aa		28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	PAGR1	Q9BTK6	254 aa		28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	RBPJL	Q9UBG7	517 aa		28.88	■■■□□ 2.21
RAP1B-233	ENST00000545720	MAGEB6P1	A0A0J9YX57	407 aa		28.87	■■■□□ 2.21
RAP1B-233	ENST00000545720	CAPN2	P17655	700 aa		28.87	■■■□□ 2.21
RAP1B-233	ENST00000545720	RAB3GAP1	Q15042	981 aa		28.87	■■■□□ 2.21
RAP1B-233	ENST00000545720	CLASRP	Q8N2M8	674 aa	Known RBP	28.87	■■■□□ 2.21
RAP1B-233	ENST00000545720	PDE6A	P16499	860 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	ERVK-9	P63128	1117 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	ERVK-24	P63145	666 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	CERKL	Q49MI3	558 aa	Predicted RBP	28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	SOCS4	Q8WXH5	440 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	KIF1BP	Q96EK5	621 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	PAWR	Q96IZ0	340 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	DNAJC2	Q99543	621 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	NUDT12	Q9BQG2	462 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	HMX1	Q9NP08	348 aa	Predicted RBP	28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	RBM27	Q9P2N5	1060 aa	Known RBP	28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	COG6	Q9Y2V7	657 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	RPTOR	Q8N122	1335 aa		28.86	■■■□□ 2.21
RAP1B-233	ENST00000545720	PLCD1	P51178	756 aa		28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	ABCB5	Q2M3G0	1257 aa		28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	SLC9C2	Q5TAH2	1124 aa		28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	CCAR1	Q8IX12	1150 aa	Known RBP	28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	DIS3L	Q8TF46	1054 aa	Known RBP	28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	GTF3C2	Q8WUA4	911 aa	Predicted RBP	28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	PORCN	Q9H237	461 aa		28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	FRMPD3	Q5JV73	1810 aa		28.85	■■■□□ 2.21
RAP1B-233	ENST00000545720	GOLIM4	O00461	696 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	EVI5	O60447	810 aa		28.84	■■■□□ 2.21
RAP1B-233	ENST00000545720	HMMR	O75330	724 aa		28.84	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms