RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.49
LDLR-204ENST00000545707 SLFN14P0C7P3 912 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 SARSP49591 514 aaKnown RBP18.08■□□□□ 0.49
LDLR-204ENST00000545707 STX17P56962 302 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 MORC3Q14149 939 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 NOM1Q5C9Z4 860 aaKnown RBP18.08■□□□□ 0.49
LDLR-204ENST00000545707 KLHL10Q6JEL2 608 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 TC2NQ8N9U0 490 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 DHX58Q96C10 678 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 WDR24Q96S15 920 aa18.08■□□□□ 0.49
LDLR-204ENST00000545707 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.08■□□□□ 0.48
LDLR-204ENST00000545707 ZNF18P17022 549 aa18.08■□□□□ 0.48
LDLR-204ENST00000545707 TBX2Q13207 712 aaPredicted RBP18.08■□□□□ 0.48
LDLR-204ENST00000545707 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
LDLR-204ENST00000545707 HOOK1Q9UJC3 728 aaKnown RBP18.08■□□□□ 0.48
LDLR-204ENST00000545707 SRPRBQ9Y5M8 271 aaKnown RBP18.08■□□□□ 0.48
LDLR-204ENST00000545707 LRP6O75581 1613 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 TNKSO95271 1327 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 PHLPP2Q6ZVD8 1323 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 COBLO75128 1261 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 ARHGAP6O43182 974 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 TEX33O43247 280 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 CHRNDQ07001 517 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 MTF1Q14872 753 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 SMYD4Q8IYR2 804 aaPredicted RBP18.07■□□□□ 0.48
LDLR-204ENST00000545707 UBXN4Q92575 508 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 STAMQ92783 540 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 FAM53CQ9NYF3 392 aa18.07■□□□□ 0.48
LDLR-204ENST00000545707 CCP110O43303 1012 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 GYG1P46976 350 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 GNG11P61952 73 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 EVX2Q03828 476 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 NT5DC1Q5TFE4 455 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 SPECC1LQ69YQ0 1117 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 MLKLQ8NB16 471 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 ENOX1Q8TC92 643 aaKnown RBP18.06■□□□□ 0.48
LDLR-204ENST00000545707 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 PNPLA7Q6ZV29 1317 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 EXOC5O00471 708 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 GNAT2P19087 354 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 DYNLL1P63167 89 aaKnown RBP18.06■□□□□ 0.48
LDLR-204ENST00000545707 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
LDLR-204ENST00000545707 V9GY48 417 aaPredicted RBP18.06■□□□□ 0.48
LDLR-204ENST00000545707 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 ZSCAN12O43309 604 aa18.05■□□□□ 0.48
LDLR-204ENST00000545707 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 KARSQ15046 597 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
LDLR-204ENST00000545707 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
LDLR-204ENST00000545707 MYH3P11055 1940 aa18.05■□□□□ 0.48
LDLR-204ENST00000545707 NUP98P52948 1817 aa18.05■□□□□ 0.48
LDLR-204ENST00000545707 CCDC196A0A1B0GTZ2 297 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 GABPB1Q06547 395 aaPredicted RBP18.04■□□□□ 0.48
LDLR-204ENST00000545707 SEC23AQ15436 765 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 PKN1Q16512 942 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 FHOD1Q9Y613 1164 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 A0A0U1RQJ8 604 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 SEC31AO94979 1220 aaKnown RBP18.04■□□□□ 0.48
LDLR-204ENST00000545707 KIF20AO95235 890 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 AKAP17AQ02040 695 aaKnown RBP18.04■□□□□ 0.48
LDLR-204ENST00000545707 TERF2Q15554 542 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
LDLR-204ENST00000545707 ATRIPQ8WXE1 791 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
LDLR-204ENST00000545707 ITGB4P16144 1822 aa18.04■□□□□ 0.48
LDLR-204ENST00000545707 TUBB4AP04350 444 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 ZNF174Q15697 407 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 CCDC152Q4G0S7 254 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 TMTC2Q8N394 836 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 RNF41Q9H4P4 317 aaPredicted RBP18.03■□□□□ 0.48
LDLR-204ENST00000545707 NID2Q14112 1375 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 TADA3O75528 432 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 CRKLP46109 303 aaKnown RBP18.03■□□□□ 0.48
LDLR-204ENST00000545707 NR1I3Q14994 352 aa18.03■□□□□ 0.48
LDLR-204ENST00000545707 NUTM2AQ8IVF1 878 aaPredicted RBP18.03■□□□□ 0.48
LDLR-204ENST00000545707 ELOA2Q8IYF1 753 aaPredicted RBP18.03■□□□□ 0.48
LDLR-204ENST00000545707 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
LDLR-204ENST00000545707 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 MYO1BO43795 1136 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 STX10O60499 249 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 ATP6V1AP38606 617 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 PLCD1P51178 756 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 ESR2Q92731 530 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 SYMPKQ92797 1274 aaKnown RBP18.02■□□□□ 0.48
LDLR-204ENST00000545707 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.48
LDLR-204ENST00000545707 CASQ1P31415 396 aa18.02■□□□□ 0.47
LDLR-204ENST00000545707 BMS1Q14692 1282 aaKnown RBP18.02■□□□□ 0.47
LDLR-204ENST00000545707 SPATA20Q8TB22 786 aa18.02■□□□□ 0.47
LDLR-204ENST00000545707 MRPL44Q9H9J2 332 aaKnown RBP18.02■□□□□ 0.47
LDLR-204ENST00000545707 DACH1Q9UI36 760 aa18.02■□□□□ 0.47
LDLR-204ENST00000545707 PNMA6AP0CW24 399 aaPredicted RBP18.01■□□□□ 0.47
LDLR-204ENST00000545707 FCHSD1Q86WN1 690 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms