RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 GJB1P08034 283 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 GNAT2P19087 354 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 C17orf99Q6UX52 265 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 RIOK1Q9BRS2 568 aaKnown RBP14.19□□□□□ -0.14
LTBR-214ENST00000545445 PUS7LQ9H0K6 701 aaKnown RBP14.19□□□□□ -0.14
LTBR-214ENST00000545445 RNF208Q9H0X6 261 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 USP40Q9NVE5 1235 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 AATFQ9NY61 560 aaKnown RBP eCLIP14.19□□□□□ -0.14
LTBR-214ENST00000545445 MYH2Q9UKX2 1941 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 MYH7P12883 1935 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 MBD4O95243 580 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 RHBDL3P58872 404 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 NMIQ13287 307 aaPredicted RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 PPIL2Q13356 520 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 CDC42EP5Q6NZY7 148 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 MIGA1Q8NAN2 632 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 IDI2Q9BXS1 227 aa14.18□□□□□ -0.14
LTBR-214ENST00000545445 CRNKL1Q9BZJ0 848 aaKnown RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 BIN2Q9UBW5 565 aaPredicted RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 RPAP1Q9BWH6 1393 aaPredicted RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 MYO5AQ9Y4I1 1855 aaKnown RBP14.18□□□□□ -0.14
LTBR-214ENST00000545445 ADGRA2Q96PE1 1338 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 GPAA1O43292 621 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 PRKCZQ05513 592 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 TEX11Q8IYF3 940 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
LTBR-214ENST00000545445 FAM227BQ96M60 508 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 STRBPQ96SI9 672 aaKnown RBP14.17□□□□□ -0.14
LTBR-214ENST00000545445 UNC93B1Q9H1C4 597 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 ATP8A2Q9NTI2 1148 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 AK9Q5TCS8 1911 aa14.17□□□□□ -0.14
LTBR-214ENST00000545445 PDHXO00330 501 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 CHGBP05060 677 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 HOXD10P28358 340 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 DYNLL1P63167 89 aaKnown RBP14.16□□□□□ -0.14
LTBR-214ENST00000545445 SLFNL1Q499Z3 407 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 FAM83AQ86UY5 434 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 LCORLQ8N3X6 602 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 SH3RF3Q8TEJ3 882 aaPredicted RBP14.16□□□□□ -0.14
LTBR-214ENST00000545445 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 ARMT1Q9H993 441 aa14.16□□□□□ -0.14
LTBR-214ENST00000545445 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 M0R2C6 588 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 SGSM2O43147 1006 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 EVI5O60447 810 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 ENTPD3O75355 529 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 USP5P45974 858 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 UBXN2AP68543 259 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 ANKRD23Q86SG2 305 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 SEC62Q99442 399 aaKnown RBP14.15□□□□□ -0.14
LTBR-214ENST00000545445 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
LTBR-214ENST00000545445 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
LTBR-214ENST00000545445 INPP5BP32019 993 aa14.14□□□□□ -0.15
LTBR-214ENST00000545445 TGFBRAP1Q8WUH2 860 aa14.14□□□□□ -0.15
LTBR-214ENST00000545445 FAM151AQ8WW52 585 aa14.14□□□□□ -0.15
LTBR-214ENST00000545445 ESYT1Q9BSJ8 1104 aa14.14□□□□□ -0.15
LTBR-214ENST00000545445 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
LTBR-214ENST00000545445 PPATQ06203 517 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 MOGSQ13724 837 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 KIAA1211Q6ZU35 1233 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
LTBR-214ENST00000545445 GABRQQ9UN88 632 aa14.13□□□□□ -0.15
LTBR-214ENST00000545445 SGPL1O95470 568 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 APPP05067 770 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 CYP2C8P10632 490 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 ELNP15502 786 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 FCGRTP55899 365 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 NFIAQ12857 509 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 ALX1Q15699 326 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
LTBR-214ENST00000545445 AMOTL1Q8IY63 956 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 HOOK2Q96ED9 719 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 ZNF341Q9BYN7 854 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 OSBPL5Q9H0X9 879 aaPredicted RBP14.12□□□□□ -0.15
LTBR-214ENST00000545445 DCP1AQ9NPI6 582 aaPredicted RBP14.12□□□□□ -0.15
LTBR-214ENST00000545445 FAM198AQ9UFP1 575 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 KCNH4Q9UQ05 1017 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 FLT1P17948 1338 aa14.12□□□□□ -0.15
LTBR-214ENST00000545445 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
LTBR-214ENST00000545445 GSG1L2A8MUP6 293 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
LTBR-214ENST00000545445 PRKAB2O43741 272 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 REC8O95072 547 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 INHAP05111 366 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
LTBR-214ENST00000545445 BCRP11274 1271 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 PICALMQ13492 652 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms