RNA–Protein interactions for RNA: ENST00000545276.1

LINC02440-201, Transcript of long intergenic non-protein coding RNA 2440, humanhuman

TSL 2 BASIC

Gene LINC02440, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02440-201ENST00000545276 SPP2Q13103 211 aa17.11■□□□□ 0.33
LINC02440-201ENST00000545276 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
LINC02440-201ENST00000545276 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
LINC02440-201ENST00000545276 EXOC6Q8TAG9 804 aa17.11■□□□□ 0.33
LINC02440-201ENST00000545276 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
LINC02440-201ENST00000545276 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
LINC02440-201ENST00000545276 AGTPBP1Q9UPW5 1226 aa17.11■□□□□ 0.33
LINC02440-201ENST00000545276 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
LINC02440-201ENST00000545276 HTTP42858 3142 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 MGAMO43451 1857 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 GDF11O95390 407 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 GABPAQ06546 454 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 C17orf99Q6UX52 265 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 PUS7LQ9H0K6 701 aaKnown RBP17.1■□□□□ 0.33
LINC02440-201ENST00000545276 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
LINC02440-201ENST00000545276 EFCC1Q9HA90 598 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
LINC02440-201ENST00000545276 HMGCS2P54868 508 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 JAG1P78504 1218 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 LACTBP83111 547 aaPredicted RBP17.09■□□□□ 0.33
LINC02440-201ENST00000545276 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 APPBP2Q92624 585 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 DDRGK1Q96HY6 314 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
LINC02440-201ENST00000545276 RNF113AO15541 343 aaKnown RBP17.08■□□□□ 0.32
LINC02440-201ENST00000545276 PRKAB2O43741 272 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 GH2P01242 217 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 CYP2C8P10632 490 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 SHMT1P34896 483 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 BACE1P56817 501 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 CAP1Q01518 475 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 KIF22Q14807 665 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.32
LINC02440-201ENST00000545276 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.32
LINC02440-201ENST00000545276 AMOTL1Q8IY63 956 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 STAP2Q9UGK3 403 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 SLC4A4Q9Y6R1 1079 aa17.08■□□□□ 0.32
LINC02440-201ENST00000545276 C19orf81C9J6K1 198 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 BCRP11274 1271 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC02440-201ENST00000545276 MTMR2Q13614 643 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 ABCB5Q2M3G0 1257 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
LINC02440-201ENST00000545276 USP17L10C9JJH3 530 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 GNRH1P01148 92 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 CYP2D6P10635 497 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
LINC02440-201ENST00000545276 OSBP2Q969R2 916 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
LINC02440-201ENST00000545276 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
LINC02440-201ENST00000545276 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
LINC02440-201ENST00000545276 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
LINC02440-201ENST00000545276 PDE1AP54750 535 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 EVX2Q03828 476 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 ARHGAP39Q9C0H5 1083 aa17.05■□□□□ 0.32
LINC02440-201ENST00000545276 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 USP17L21D6R901 530 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 GPAA1O43292 621 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 IGHDP01880 384 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 GNAT2P19087 354 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 PRMT2P55345 433 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
LINC02440-201ENST00000545276 OSBPP22059 807 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
LINC02440-201ENST00000545276 NUCB1Q02818 461 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 SLC44A5Q8NCS7 719 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 EVI5LQ96CN4 794 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 C12orf42Q96LP6 360 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 FEZ1Q99689 392 aa17.03■□□□□ 0.32
LINC02440-201ENST00000545276 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
LINC02440-201ENST00000545276 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 CENPFP49454 3210 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 GSG1L2A8MUP6 293 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 M0R2C6 588 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 GUCY1A2P33402 732 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 PSMC4P43686 418 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
LINC02440-201ENST00000545276 USP14P54578 494 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 FCGRTP55899 365 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 TRIM47Q96LD4 638 aa17.02■□□□□ 0.32
LINC02440-201ENST00000545276 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms