RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RGS2P41220 211 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 APBA2Q99767 749 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 DNAJC18Q9H819 358 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
CHD4-212ENST00000545083 PTPRCP08575 1304 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 FRMPD3Q5JV73 1810 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 IL15P40933 162 aaPredicted RBP11.66□□□□□ -0.54
CHD4-212ENST00000545083 RTP1P59025 263 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 TIMM10P62072 90 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
CHD4-212ENST00000545083 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
CHD4-212ENST00000545083 TMOD4Q9NZQ9 345 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
CHD4-212ENST00000545083 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 CNMDO75829 334 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 MAP2K5Q13163 448 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 TRPV1Q8NER1 839 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 MRS2Q9HD23 443 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 DDX20Q9UHI6 824 aaKnown RBP11.65□□□□□ -0.54
CHD4-212ENST00000545083 RAPGEFL1Q9UHV5 662 aa11.65□□□□□ -0.54
CHD4-212ENST00000545083 HERC5Q9UII4 1024 aaKnown RBP11.65□□□□□ -0.54
CHD4-212ENST00000545083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.65□□□□□ -0.54
CHD4-212ENST00000545083 GDF11O95390 407 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 ASNSP08243 561 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 COL9A1P20849 921 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
CHD4-212ENST00000545083 TEX11Q8IYF3 940 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 SH3RF3Q8TEJ3 882 aaPredicted RBP11.64□□□□□ -0.55
CHD4-212ENST00000545083 LPAR1Q92633 364 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
CHD4-212ENST00000545083 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
CHD4-212ENST00000545083 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 C19orf81C9J6K1 198 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 DNM1LO00429 736 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
CHD4-212ENST00000545083 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
CHD4-212ENST00000545083 FOSL2P15408 326 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 CNGA1P29973 690 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 CYP2C19P33261 490 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
CHD4-212ENST00000545083 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
CHD4-212ENST00000545083 MFSD14CQ5VZR4 134 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 NPLOC4Q8TAT6 608 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 BADQ92934 168 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 PI4KBQ9UBF8 816 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
CHD4-212ENST00000545083 IGHA2P01877 340 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 LDHCP07864 332 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 HOXC6P09630 235 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 PTPREP23469 700 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 GSTO1P78417 241 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 TFCP2Q12800 502 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 SLC39A5Q6ZMH5 540 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 METTL16Q86W50 562 aaKnown RBP11.62□□□□□ -0.55
CHD4-212ENST00000545083 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
CHD4-212ENST00000545083 PRDM5Q9NQX1 630 aaPredicted RBP11.62□□□□□ -0.55
CHD4-212ENST00000545083 PDLIM7Q9NR12 457 aa11.62□□□□□ -0.55
CHD4-212ENST00000545083 ZNF521Q96K83 1311 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 MSCO60682 206 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 CYBAP13498 195 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 ITGB8P26012 769 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
CHD4-212ENST00000545083 TRIM60Q495X7 471 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
CHD4-212ENST00000545083 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
CHD4-212ENST00000545083 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
CHD4-212ENST00000545083 DHX36Q9H2U1 1008 aaKnown RBP11.61□□□□□ -0.55
CHD4-212ENST00000545083 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 BTBD7Q9P203 1132 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 RABGAP1Q9Y3P9 1069 aa11.61□□□□□ -0.55
CHD4-212ENST00000545083 RLFQ13129 1914 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 TNFRSF10AO00220 468 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 EPHB4P54760 987 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 GRB14Q14449 540 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 GRIN2CQ14957 1233 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 SNX17Q15036 470 aa11.6□□□□□ -0.55
CHD4-212ENST00000545083 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms