RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MTFR1Q15390 333 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 ATP2B3Q16720 1220 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 BMP2KLQ5H9B9 411 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 UBE2Q1Q7Z7E8 422 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 GPATCH3Q96I76 525 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 PARK7Q99497 189 aaKnown RBP7.99□□□□□ -1.13
CDCA3-209ENST00000544610 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 ARIH1Q9Y4X5 557 aaPredicted RBP7.99□□□□□ -1.13
CDCA3-209ENST00000544610 MYPNQ86TC9 1320 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 SALL3Q9BXA9 1300 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 RANBP2P49792 3224 aaKnown RBP7.99□□□□□ -1.13
CDCA3-209ENST00000544610 DOCK2Q92608 1830 aa7.99□□□□□ -1.13
CDCA3-209ENST00000544610 A0A0G2JLL6 359 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-209ENST00000544610 PHF20L1A8MW92 1017 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 ERC2O15083 957 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-209ENST00000544610 HOXD10P28358 340 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 GRK4P32298 578 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 GJA8P48165 433 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 PRRT2Q7Z6L0 340 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-209ENST00000544610 ZFPM1Q8IX07 1006 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 NKX2-3Q8TAU0 364 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 RAET1EQ8TD07 263 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDCA3-209ENST00000544610 IDI2Q9BXS1 227 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 SIL1Q9H173 461 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 USP40Q9NVE5 1235 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 GNL3LQ9NVN8 582 aaKnown RBP7.98□□□□□ -1.13
CDCA3-209ENST00000544610 CEP126Q9P2H0 1117 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 DENND2AQ9ULE3 1009 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 EXOC6BQ9Y2D4 811 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 GAKO14976 1311 aa7.98□□□□□ -1.13
CDCA3-209ENST00000544610 ENTPD3O75355 529 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 GJB1P08034 283 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 CYP2C8P10632 490 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 CCL5P13501 91 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 PTPRAP18433 802 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 PHKA1P46020 1223 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 FCGRTP55899 365 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 PRKCZQ05513 592 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 OS9Q13438 667 aaPredicted RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 FASTKD5Q7L8L6 764 aaKnown RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 ZNF512BQ96KM6 892 aaPredicted RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 SLC45A1Q9Y2W3 748 aa7.97□□□□□ -1.13
CDCA3-209ENST00000544610 PDS5AQ29RF7 1337 aaKnown RBP7.97□□□□□ -1.13
CDCA3-209ENST00000544610 EPB41L2O43491 1005 aaKnown RBP7.96□□□□□ -1.14
CDCA3-209ENST00000544610 MX1P20591 662 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 RGS3P49796 1198 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 PDE1AP54750 535 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 UBXN2AP68543 259 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 RASGRF1Q13972 1273 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 CCDC102BQ68D86 513 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 SH3BP5LQ7L8J4 393 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 RNF208Q9H0X6 261 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 OCEL1Q9H607 264 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 GABRQQ9UN88 632 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 AFG3L2Q9Y4W6 797 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 ZHX2Q9Y6X8 837 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 DOCK1Q14185 1865 aa7.96□□□□□ -1.14
CDCA3-209ENST00000544610 KIAA0100Q14667 2235 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 DDTLA6NHG4 134 aaPredicted RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 IFIT2P09913 472 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 ADORA1P30542 326 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 IRF5Q13568 498 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 TNNI3KQ59H18 835 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 DZIP1Q86YF9 867 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 PXYLP1Q8TE99 480 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 U2AF1L4Q8WU68 220 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 DPF3Q92784 378 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 HTATIP2Q9BUP3 242 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 PRO3102Q9H379 93 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 DDX4Q9NQI0 724 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 RBM27Q9P2N5 1060 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 BIN2Q9UBW5 565 aaPredicted RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 PA2G4Q9UQ80 394 aaKnown RBP7.95□□□□□ -1.14
CDCA3-209ENST00000544610 FPGT-TNNI3KV9GXZ4 949 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 LAMA3Q16787 3333 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 MROH7-TTC4A0A0A0MT08 1334 aa7.95□□□□□ -1.14
CDCA3-209ENST00000544610 COL2A1P02458 1487 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 PHIPQ8WWQ0 1821 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 ADCY3O60266 1144 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 FARP2O94887 1054 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-209ENST00000544610 SGPL1O95470 568 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 CAPN2P17655 700 aa7.94□□□□□ -1.14
CDCA3-209ENST00000544610 ATP5JP18859 108 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms