RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 C1orf127Q8N9H9 656 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 GPRASP2Q96D09 838 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 SUV39H2Q9H5I1 410 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 TIMMDC1Q9NPL8 285 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 KIF13BQ9NQT8 1826 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
CPSF7-222ENST00000544585 SRP68Q9UHB9 627 aaKnown RBP8.16□□□□□ -1.1
CPSF7-222ENST00000544585 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
CPSF7-222ENST00000544585 KDRP35968 1356 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 A0A1W2PNR3 127 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 POTECB2RU33 542 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 SERPINB2P05120 415 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 BMP2P12643 396 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 SMPD1P17405 629 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 CES1P23141 567 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 MSX1P28360 303 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 ZNF530Q6P9A1 599 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-222ENST00000544585 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
CPSF7-222ENST00000544585 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 ZSWIM4Q9H7M6 989 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 TOR4AQ9NXH8 423 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 NARFQ9UHQ1 456 aa8.15□□□□□ -1.1
CPSF7-222ENST00000544585 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.11
CPSF7-222ENST00000544585 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.11
CPSF7-222ENST00000544585 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 TNFRSF10AO00220 468 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 GDF9O60383 454 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 FGRP09769 529 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-222ENST00000544585 TYRO3Q06418 890 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 GRM2Q14416 872 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 RNF217Q8TC41 542 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 NOC4LQ9BVI4 516 aaKnown RBP8.14□□□□□ -1.11
CPSF7-222ENST00000544585 C11orf16Q9NQ32 467 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 COPRSQ9NQ92 184 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 CNTN3Q9P232 1028 aa8.14□□□□□ -1.11
CPSF7-222ENST00000544585 C4AP0C0L4 1744 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 TLDC2A0PJX2 215 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 CAPN5O15484 640 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-222ENST00000544585 EGFRP00533 1210 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 CTCFP49711 727 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-222ENST00000544585 RASSF7Q02833 373 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 PWP1Q13610 501 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 NFIXQ14938 502 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 HPS1Q92902 700 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 SPON2Q9BUD6 331 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 EHD4Q9H223 541 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 KBTBD4Q9NVX7 518 aa8.13□□□□□ -1.11
CPSF7-222ENST00000544585 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-222ENST00000544585 A0A087WZG4 1122 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 EDN3P14138 238 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 PDE6BP35913 854 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 RSRP1Q9BUV0 290 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 BRD7Q9NPI1 651 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 ARFGEF1Q9Y6D6 1849 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
CPSF7-222ENST00000544585 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 FOXN1O15353 648 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPSF7-222ENST00000544585 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-222ENST00000544585 RHOQP17081 205 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 GRNP28799 593 aaKnown RBP8.11□□□□□ -1.11
CPSF7-222ENST00000544585 TNNT2P45379 298 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-222ENST00000544585 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-222ENST00000544585 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 KIAA0319Q5VV43 1072 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 KIAA0825Q8IV33 1275 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 PGBD3Q8N328 593 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.112e-6■□□□□ 9.3
CPSF7-222ENST00000544585 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
CPSF7-222ENST00000544585 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-222ENST00000544585 NFKBIEO00221 500 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 CKAP2LQ8IYA6 745 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 SEC16BQ96JE7 1060 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-222ENST00000544585 PIF1Q9H611 641 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 SBF1O95248 1867 aa8.1□□□□□ -1.11
CPSF7-222ENST00000544585 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
CPSF7-222ENST00000544585 A0A1W2PP55 124 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-222ENST00000544585 STARD3NLO95772 234 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 RLBP1P12271 317 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 GBP2P32456 591 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-222ENST00000544585 VEGFBP49765 207 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 FCGRTP55899 365 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-222ENST00000544585 DEFB115Q30KQ5 88 aa8.09□□□□□ -1.11
CPSF7-222ENST00000544585 SULT6B1Q6IMI4 303 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms