RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-224ENST00000544513 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
SEMA4D-224ENST00000544513 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
SEMA4D-224ENST00000544513 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
SEMA4D-224ENST00000544513 DEFB118Q96PH6 123 aa16.97■□□□□ 0.31
SEMA4D-224ENST00000544513 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
SEMA4D-224ENST00000544513 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-224ENST00000544513 CYP7A1P22680 504 aa16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 CEP85Q6P2H3 762 aa16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 CERS3Q8IU89 383 aa16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.31
SEMA4D-224ENST00000544513 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 HMGCRP04035 888 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 POTEEQ6S8J3 1075 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 CRACR2BQ8N4Y2 399 aaPredicted RBP16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 RBM27Q9P2N5 1060 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 PLXNB2O15031 1838 aa16.95■□□□□ 0.3
SEMA4D-224ENST00000544513 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 IDH1O75874 414 aaKnown RBP16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 GDF11O95390 407 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 HERVK_113P62684 666 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 IRX3P78415 501 aaPredicted RBP16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 TATDN1Q6P1N9 297 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 EHD4Q9H223 541 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 EMILIN3Q9NT22 766 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
SEMA4D-224ENST00000544513 HLA-DOAP06340 250 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 MIER1Q8N108 512 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 TRIM34Q9BYJ4 488 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 ANTXR1Q9H6X2 564 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 RPTORQ8N122 1335 aa16.93■□□□□ 0.3
SEMA4D-224ENST00000544513 PEX10O60683 326 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 GH2P01242 217 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 XRCC5P13010 732 aaKnown RBP16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 TRIM32Q13049 653 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 MAP3K21Q5TCX8 1036 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 ERC1Q8IUD2 1116 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 ANKLE1Q8NAG6 615 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 USP6NLQ92738 828 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 PAWRQ96IZ0 340 aaKnown RBP16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 NDUFB9Q9Y6M9 179 aa16.92■□□□□ 0.3
SEMA4D-224ENST00000544513 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 Q3C1V9 767 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 PANK1Q8TE04 598 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 DIS3LQ8TF46 1054 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 TRIB2Q92519 343 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 MYH1P12882 1939 aa16.91■□□□□ 0.3
SEMA4D-224ENST00000544513 DNAH12Q6ZR08 3092 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 EVI5O60447 810 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 MAPK4P31152 587 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 ERVK-24P63145 666 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 NECAB2Q7Z6G3 386 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 AACSQ86V21 672 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 GTF3C2Q8WUA4 911 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 SOCS4Q8WXH5 440 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 HMX1Q9NP08 348 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 ZBED9Q6R2W3 1325 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
SEMA4D-224ENST00000544513 USP5P45974 858 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 MORN1Q5T089 497 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 NUDT12Q9BQG2 462 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 PORCNQ9H237 461 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 OGDHLQ9ULD0 1010 aa16.89■□□□□ 0.29
SEMA4D-224ENST00000544513 A0A0C4DFX4 3053 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 CYP2B6P20813 491 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 SHMT1P34896 483 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
SEMA4D-224ENST00000544513 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 COL6A3P12111 3177 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms