RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 MAP3K12Q12852 859 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 NR5A1Q13285 461 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 INCENPQ9NQS7 918 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 NDUFAB1O14561 156 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 MYO1BO43795 1136 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 USO1O60763 962 aaKnown RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 MRPS25P82663 173 aaKnown RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 SPAG1Q07617 926 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 WHAMMP3Q1A5X7 153 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 ILDR1Q86SU0 546 aaPredicted RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 ZNF513Q8N8E2 541 aaPredicted RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 BCAS4Q8TDM0 211 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 HSF2BPO75031 334 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 INPP5BP32019 993 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 PLCD1P51178 756 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 APOA5Q6Q788 366 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 TC2NQ8N9U0 490 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 PLBD2Q8NHP8 589 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 ENOX1Q8TC92 643 aaKnown RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
ABCB1-210ENST00000543898 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 SAR1BQ9Y6B6 198 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 AKR1B10O60218 316 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 CYLC1P35663 651 aaPredicted RBP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MAGEA9P43362 315 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 KIF5AQ12840 1032 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 TUBB2AQ13885 445 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MAATS1Q7Z4T9 603 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MIGA1Q8NAN2 632 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 TUBB2BQ9BVA1 445 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 CSRNP2Q9H175 543 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MCM7P33993 719 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 HLTFQ14527 1009 aaKnown RBP eCLIP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MUM1L1Q5H9M0 696 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SPATA1Q5VX52 437 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 TTLL7Q6ZT98 887 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MED4Q9NPJ6 270 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 A2ML1A8K2U0 1454 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SRGAP2O75044 1071 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SLC4A8Q2Y0W8 1093 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 VPS54Q9P1Q0 977 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 ERCC3P19447 782 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 KRT83P78385 493 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 TDRD12Q587J7 1177 aaKnown RBP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 RESP18Q5W5W9 173 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 GSPT2Q8IYD1 628 aaKnown RBP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 MAGEB6Q8N7X4 407 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 CCDC42Q96M95 316 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 PCDHB6Q9Y5E3 794 aa9.66□□□□□ -0.86
ABCB1-210ENST00000543898 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
ABCB1-210ENST00000543898 CDC25AP30304 524 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 RNASE9P60153 205 aaKnown RBP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 GNGT1P63211 74 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 SARNPP82979 210 aaKnown RBP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 TTF1Q15361 905 aaPredicted RBP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 EHBP1Q8NDI1 1231 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 PNKPQ96T60 521 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 CDC42BPGQ6DT37 1551 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 MBD4O95243 580 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 SSBP05455 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 STAT6P42226 847 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 EVA1CP58658 441 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 RAD9BQ6WBX8 426 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 CCDC91Q7Z6B0 441 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 CEP57Q86XR8 500 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 ANKRD18AQ8IVF6 992 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 JAKMIP2Q96AA8 810 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 ARMT1Q9H993 441 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
ABCB1-210ENST00000543898 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 ANKRD18BA2A2Z9 1011 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 OPA1O60313 960 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 UBA7P41226 1012 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 EPSTI1Q96J88 318 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 KRT23Q9C075 422 aa9.65□□□□□ -0.86
ABCB1-210ENST00000543898 KAT6BQ8WYB5 2073 aa9.65□□□□□ -0.87
ABCB1-210ENST00000543898 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.87
ABCB1-210ENST00000543898 CDC27P30260 824 aa9.64□□□□□ -0.87
ABCB1-210ENST00000543898 CT47A1Q5JQC4 288 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms