RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
SPPL3-208ENST00000543854 ADGRA2Q96PE1 1338 aa23.02■■□□□ 1.28
SPPL3-208ENST00000543854 CYP2C8P10632 490 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 PLCD1P51178 756 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 KIF22Q14807 665 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 LRRFIP1Q32MZ4 808 aaKnown RBP23.01■■□□□ 1.27
SPPL3-208ENST00000543854 TATDN1Q6P1N9 297 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 PROCA1Q8NCQ7 364 aaPredicted RBP23.01■■□□□ 1.27
SPPL3-208ENST00000543854 EXOC6Q8TAG9 804 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 WDR18Q9BV38 432 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 ATP8A2Q9NTI2 1148 aa23.01■■□□□ 1.27
SPPL3-208ENST00000543854 BAZ2AQ9UIF9 1905 aaKnown RBP23■■□□□ 1.27
SPPL3-208ENST00000543854 PRKAB2O43741 272 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 ZFYP08048 801 aaPredicted RBP23■■□□□ 1.27
SPPL3-208ENST00000543854 HMGCS2P54868 508 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 JAG1P78504 1218 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 LACTBP83111 547 aaPredicted RBP23■■□□□ 1.27
SPPL3-208ENST00000543854 MTMR2Q13614 643 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 SHROOM1Q2M3G4 852 aaPredicted RBP23■■□□□ 1.27
SPPL3-208ENST00000543854 C17orf99Q6UX52 265 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 AMOTL1Q8IY63 956 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
SPPL3-208ENST00000543854 PNMA3Q9UL41 463 aa23■■□□□ 1.27
SPPL3-208ENST00000543854 ZSWIM8A7E2V4 1837 aa22.99■■□□□ 1.27
SPPL3-208ENST00000543854 GH2P01242 217 aa22.99■■□□□ 1.27
SPPL3-208ENST00000543854 SMCR8Q8TEV9 937 aaPredicted RBP22.99■■□□□ 1.27
SPPL3-208ENST00000543854 APPBP2Q92624 585 aa22.99■■□□□ 1.27
SPPL3-208ENST00000543854 PUS7LQ9H0K6 701 aaKnown RBP22.99■■□□□ 1.27
SPPL3-208ENST00000543854 SALL3Q9BXA9 1300 aa22.99■■□□□ 1.27
SPPL3-208ENST00000543854 MYH8P13535 1937 aa22.98■■□□□ 1.27
SPPL3-208ENST00000543854 CERKLQ49MI3 558 aaPredicted RBP22.98■■□□□ 1.27
SPPL3-208ENST00000543854 SH3D19Q5HYK7 790 aa22.98■■□□□ 1.27
SPPL3-208ENST00000543854 TREML2Q5T2D2 321 aa22.98■■□□□ 1.27
SPPL3-208ENST00000543854 TMOD4Q9NZQ9 345 aa22.98■■□□□ 1.27
SPPL3-208ENST00000543854 SLC4A4Q9Y6R1 1079 aa22.98■■□□□ 1.27
SPPL3-208ENST00000543854 RNF113AO15541 343 aaKnown RBP22.97■■□□□ 1.27
SPPL3-208ENST00000543854 SHMT1P34896 483 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 BACE1P56817 501 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 CAP1Q01518 475 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 GABPAQ06546 454 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 PABPC4Q13310 644 aaKnown RBP eCLIP22.97■■□□□ 1.27
SPPL3-208ENST00000543854 ABCB5Q2M3G0 1257 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 FSD1Q9BTV5 496 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 TAOK2Q9UL54 1235 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 PTPN22Q9Y2R2 807 aa22.97■■□□□ 1.27
SPPL3-208ENST00000543854 CYP2D6P10635 497 aa22.96■■□□□ 1.27
SPPL3-208ENST00000543854 EVX2Q03828 476 aa22.96■■□□□ 1.27
SPPL3-208ENST00000543854 CABP5Q9NP86 173 aa22.96■■□□□ 1.27
SPPL3-208ENST00000543854 SWAP70Q9UH65 585 aa22.96■■□□□ 1.27
SPPL3-208ENST00000543854 CENPFP49454 3210 aa22.95■■□□□ 1.27
SPPL3-208ENST00000543854 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 USP17L10C9JJH3 530 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 GNRH1P01148 92 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 BCRP11274 1271 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 RAB3GAP1Q15042 981 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 SMC5Q8IY18 1101 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 OSBP2Q969R2 916 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 FEZ1Q99689 392 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 ARHGAP39Q9C0H5 1083 aa22.95■■□□□ 1.26
SPPL3-208ENST00000543854 STRBPQ96SI9 672 aaKnown RBP22.94■■□□□ 1.26
SPPL3-208ENST00000543854 LNPKQ9C0E8 428 aa22.94■■□□□ 1.26
SPPL3-208ENST00000543854 ARPP21Q9UBL0 812 aaPredicted RBP22.94■■□□□ 1.26
SPPL3-208ENST00000543854 STAP2Q9UGK3 403 aa22.94■■□□□ 1.26
SPPL3-208ENST00000543854 USP17L12C9JPN9 530 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 USP17L21D6R901 530 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 GPAA1O43292 621 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 ECM2O94769 699 aaPredicted RBP22.93■■□□□ 1.26
SPPL3-208ENST00000543854 OSBPP22059 807 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 PDE1AP54750 535 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 SLC44A5Q8NCS7 719 aa22.93■■□□□ 1.26
SPPL3-208ENST00000543854 CYP2D7A0A087X1C5 515 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 MPHOSPH10O00566 681 aaKnown RBP22.92■■□□□ 1.26
SPPL3-208ENST00000543854 PSMC4P43686 418 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 SOX10P56693 466 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 IRX3P78415 501 aaPredicted RBP22.92■■□□□ 1.26
SPPL3-208ENST00000543854 C12orf60Q5U649 245 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 B4GALNT3Q6L9W6 998 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 DYNLL2Q96FJ2 89 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 MGAMO43451 1857 aa22.92■■□□□ 1.26
SPPL3-208ENST00000543854 M0R2C6 588 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 FMNL1O95466 1100 aaPredicted RBP22.91■■□□□ 1.26
SPPL3-208ENST00000543854 IGHDP01880 384 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 GNAT2P19087 354 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 PRMT2P55345 433 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 FCGRTP55899 365 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 GIMAP6Q6P9H5 292 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 USP17L2Q6R6M4 530 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 TRIM47Q96LD4 638 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 ASCC2Q9H1I8 757 aaPredicted RBP22.91■■□□□ 1.26
SPPL3-208ENST00000543854 PTCH2Q9Y6C5 1203 aa22.91■■□□□ 1.26
SPPL3-208ENST00000543854 HOXD10P28358 340 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 GCLCP48506 637 aaPredicted RBP22.9■■□□□ 1.26
SPPL3-208ENST00000543854 USP14P54578 494 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 ZYXQ15942 572 aaKnown RBP22.9■■□□□ 1.26
SPPL3-208ENST00000543854 CTR9Q6PD62 1173 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 TMEM179Q6ZVK1 233 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 C16orf86Q6ZW13 317 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 CHD1LQ86WJ1 897 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 ANKRD13CQ8N6S4 541 aa22.9■■□□□ 1.26
SPPL3-208ENST00000543854 EVI5LQ96CN4 794 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms