RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
VPS37B-204ENST00000543590 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
VPS37B-204ENST00000543590 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
VPS37B-204ENST00000543590 ZSWIM8A7E2V4 1837 aa17.25■□□□□ 0.35
VPS37B-204ENST00000543590 GNRH1P01148 92 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 CTGFP29279 349 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 PSMC4P43686 418 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 PTCH2Q9Y6C5 1203 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
VPS37B-204ENST00000543590 PRKAB2O43741 272 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 GH2P01242 217 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 BACE1P56817 501 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 MTMR2Q13614 643 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
VPS37B-204ENST00000543590 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
VPS37B-204ENST00000543590 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
VPS37B-204ENST00000543590 LOC285556D6RIA3 1793 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 SHMT1P34896 483 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 EVX2Q03828 476 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 GABPAQ06546 454 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 ARMC5Q96C12 935 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 MYH7P12883 1935 aa17.23■□□□□ 0.35
VPS37B-204ENST00000543590 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
VPS37B-204ENST00000543590 CYP2D6P10635 497 aa17.22■□□□□ 0.35
VPS37B-204ENST00000543590 PRMT2P55345 433 aa17.22■□□□□ 0.35
VPS37B-204ENST00000543590 PABPC4Q13310 644 aaKnown RBP eCLIP17.22■□□□□ 0.35
VPS37B-204ENST00000543590 HDAC1Q13547 482 aaPredicted RBP17.22■□□□□ 0.35
VPS37B-204ENST00000543590 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
VPS37B-204ENST00000543590 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
VPS37B-204ENST00000543590 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
VPS37B-204ENST00000543590 TTC41PQ6P2S7 1318 aa17.22■□□□□ 0.35
VPS37B-204ENST00000543590 OSBPP22059 807 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 FCGRTP55899 365 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 AAMPQ13685 434 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 SLC9C1Q4G0N8 1177 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
VPS37B-204ENST00000543590 SRRDQ9UH36 339 aa17.21■□□□□ 0.35
VPS37B-204ENST00000543590 ERC2O15083 957 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 HOXD10P28358 340 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 CABP5Q9NP86 173 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 SLC4A4Q9Y6R1 1079 aa17.2■□□□□ 0.34
VPS37B-204ENST00000543590 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
VPS37B-204ENST00000543590 MX1P20591 662 aa17.19■□□□□ 0.34
VPS37B-204ENST00000543590 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
VPS37B-204ENST00000543590 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
VPS37B-204ENST00000543590 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
VPS37B-204ENST00000543590 ZNF333Q96JL9 665 aa17.19■□□□□ 0.34
VPS37B-204ENST00000543590 EMILIN3Q9NT22 766 aa17.19■□□□□ 0.34
VPS37B-204ENST00000543590 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
VPS37B-204ENST00000543590 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 USP17L21D6R901 530 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 GUCY1A2P33402 732 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 GCLCP48506 637 aaPredicted RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 USP17L2Q6R6M4 530 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 APPBP2Q92624 585 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 OSBP2Q969R2 916 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 MYPNQ86TC9 1320 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 SALL3Q9BXA9 1300 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 BAZ2AQ9UIF9 1905 aaKnown RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 ZFYP08048 801 aaPredicted RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 IRX3P78415 501 aaPredicted RBP17.18■□□□□ 0.34
VPS37B-204ENST00000543590 SEPT2Q15019 361 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 FEZ1Q99689 392 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
VPS37B-204ENST00000543590 POTEFA5A3E0 1075 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 PRKCZQ05513 592 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 ZYXQ15942 572 aaKnown RBP17.17■□□□□ 0.34
VPS37B-204ENST00000543590 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 RAET1EQ8TD07 263 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 ACER1Q8TDN7 264 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
VPS37B-204ENST00000543590 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 GABRQQ9UN88 632 aa17.17■□□□□ 0.34
VPS37B-204ENST00000543590 MGAMO43451 1857 aa17.16■□□□□ 0.34
VPS37B-204ENST00000543590 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms