RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CAP2P40123 477 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 VEGFBP49765 207 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ATP2B2Q01814 1243 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 MAP3K10Q02779 954 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 PTH1RQ03431 593 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 TRDNQ13061 729 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 MFSD6Q6ZSS7 791 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 C16orf86Q6ZW13 317 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ERO1BQ86YB8 467 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 RASAL3Q86YV0 1011 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 SLC44A5Q8NCS7 719 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 WNK4Q96J92 1243 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 IL25Q9H293 177 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 RNF41Q9H4P4 317 aaPredicted RBP7.49□□□□□ -1.21
LTBR-212ENST00000543542 DNAJC18Q9H819 358 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 SNCAIPQ9Y6H5 919 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ZHX2Q9Y6X8 837 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 ZMYM6O95789 1325 aa7.49□□□□□ -1.21
LTBR-212ENST00000543542 LAMA4Q16363 1823 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 TRIM75PA6NK02 468 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 USP17L5A8MUK1 530 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 SMIM22K7EJ46 135 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 FOXP2O15409 715 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 RAD21O60216 631 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 AOC2O75106 756 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 SLC10A3P09131 477 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 ZBTB48P10074 688 aaPredicted RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 AKR1B1P15121 316 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 PTPRAP18433 802 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 MCCP23508 829 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 PPATQ06203 517 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 GABPAQ06546 454 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 NOGQ13253 232 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 TATDN1Q6P1N9 297 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 TMEM179Q6ZVK1 233 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 CCDC84Q86UT8 332 aaPredicted RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 METTL16Q86W50 562 aaKnown RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 CNKSR2Q8WXI2 1034 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 CCDC17Q96LX7 622 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 FEZ1Q99689 392 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 BEGAINQ9BUH8 593 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 GINM1Q9NU53 330 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 ZBTB21Q9ULJ3 1066 aa7.48□□□□□ -1.21
LTBR-212ENST00000543542 RBM8AQ9Y5S9 174 aaKnown RBP7.48□□□□□ -1.21
LTBR-212ENST00000543542 ROBO3Q96MS0 1386 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 MANSC4A6NHS7 340 aaPredicted RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 ZKSCAN1P17029 563 aaPredicted RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 GTF2A2P52657 109 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 TFAP4Q01664 338 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 PPIL2Q13356 520 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 SNAPC2Q13487 334 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 RRP1BQ14684 758 aaKnown RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 SEPT2Q15019 361 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 ZYXQ15942 572 aaKnown RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 FAM47AQ5JRC9 791 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 OTUD7BQ6GQQ9 843 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 GADL1Q6ZQY3 521 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 RALYLQ86SE5 291 aaKnown RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 ESR2Q92731 530 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 MAP4K1Q92918 833 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 TBC1D2Q9BYX2 928 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 KRT23Q9C075 422 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 LSG1Q9H089 658 aaKnown RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 SH2D4AQ9H788 454 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 CNNM2Q9H8M5 875 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 ARHGEF10LQ9HCE6 1279 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 INCENPQ9NQS7 918 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 TMOD4Q9NZQ9 345 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 ANAPC4Q9UJX5 808 aa7.47□□□□□ -1.21
LTBR-212ENST00000543542 ISY1Q9ULR0 285 aaKnown RBP7.47□□□□□ -1.21
LTBR-212ENST00000543542 CCL15-CCL14A0A0B4J2E2 113 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 FAM155AB1AL88 458 aaPredicted RBP7.46□□□□□ -1.22
LTBR-212ENST00000543542 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 IRF6O14896 467 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 CYP21A2P08686 494 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 PCP11498 1178 aaKnown RBP7.46□□□□□ -1.22
LTBR-212ENST00000543542 CETPP11597 493 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 RASA1P20936 1047 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 MAP2K2P36507 400 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 ICA1Q05084 483 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 SPP2Q13103 211 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 CCL15Q16663 113 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 SHROOM1Q2M3G4 852 aaPredicted RBP7.46□□□□□ -1.22
LTBR-212ENST00000543542 PPP4R3BQ5MIZ7 849 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 TBC1D10CQ8IV04 446 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 REM2Q8IYK8 340 aaPredicted RBP7.46□□□□□ -1.22
LTBR-212ENST00000543542 ZNF280CQ8ND82 737 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 STAG1Q8WVM7 1258 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 KANSL2Q9H9L4 492 aa7.46□□□□□ -1.22
LTBR-212ENST00000543542 STX8Q9UNK0 236 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms