RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 GAKO14976 1311 aa9.2□□□□□ -0.94
TRIM59-208ENST00000543469 STK36Q9NRP7 1315 aa9.2□□□□□ -0.94
TRIM59-208ENST00000543469 CTDSPL2Q05D32 466 aa9.2□□□□□ -0.94
TRIM59-208ENST00000543469 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
TRIM59-208ENST00000543469 CTAGE5O15320 804 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 KRT2P35908 639 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 DYNLL1P63167 89 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 C12orf60Q5U649 245 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 OSBPL5Q9H0X9 879 aaPredicted RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 TNKSO95271 1327 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 GSG1L2A8MUP6 293 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SH2B2O14492 632 aaPredicted RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 KINO60870 393 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 TPM2P07951 284 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 VIL1P09327 827 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 ZNF76P36508 570 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 ICA1Q05084 483 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 DHX8Q14562 1220 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 KCNG4Q8TDN1 519 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SDR42E1Q8WUS8 393 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SPATA32Q96LK8 384 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 RNF26Q9BY78 433 aaPredicted RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 CCDC39Q9UFE4 941 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 PTPDC1A2A3K4 754 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 APOBRQ0VD83 1088 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SCARF1Q14162 830 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 HSP90AA2PQ14568 343 aaPredicted RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 OTUD7BQ6GQQ9 843 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 KANK3Q6NY19 840 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 PPP1R18Q6NYC8 613 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 PI16Q6UXB8 463 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 SEC62Q99442 399 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 ADARB2Q9NS39 739 aaKnown RBP9.19□□□□□ -0.94
TRIM59-208ENST00000543469 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 CDK8P49336 464 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 KRT25Q7Z3Z0 450 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 MTMR7Q9Y216 660 aa9.19□□□□□ -0.94
TRIM59-208ENST00000543469 PSMD14O00487 310 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 SLC1A4P43007 532 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 SH3GLB2Q9NR46 395 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 TCP10L2B9ZVM9 353 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 CCT2P78371 535 aaKnown RBP9.18□□□□□ -0.94
TRIM59-208ENST00000543469 SGMS1Q86VZ5 419 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 FBXL16Q8N461 479 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 IL17RAQ96F46 866 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 IDI2Q9BXS1 227 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 NAPAP54920 295 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 C16orf86Q6ZW13 317 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 MCF2L2Q86YR7 1114 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
TRIM59-208ENST00000543469 CUL4AQ13619 759 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 NBR1Q14596 966 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 RILPL1Q5EBL4 403 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 DACT2Q5SW24 774 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 CTR9Q6PD62 1173 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 FANCBQ8NB91 859 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 PNMA1Q8ND90 353 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 BMP2KQ9NSY1 1161 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 ZNF70Q9UC06 446 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 CNOT7Q9UIV1 285 aaKnown RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 ARHGEF6Q15052 776 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 ERMNQ8TAM6 284 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 BRWD3Q6RI45 1802 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 FLT1P17948 1338 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 COL24A1Q17RW2 1714 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 SEC24BO95487 1268 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 FOSP01100 380 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 ORC2Q13416 577 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 RAB3GAP1Q15042 981 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 MB21D2Q8IYB1 491 aaPredicted RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 DDX11Q96FC9 970 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 SLC5A4Q9NY91 659 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 OSBPP22059 807 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
TRIM59-208ENST00000543469 NYAP2Q9P242 653 aa9.17□□□□□ -0.94
TRIM59-208ENST00000543469 TCRBV5S4A2TA0A5A2 114 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 TCP10Q12799 353 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 LRP5O75197 1615 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 TPM3P06753 285 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 HOXA7P31268 230 aaPredicted RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 CDC42EP5Q6NZY7 148 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SASS6Q6UVJ0 657 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SMARCC2Q8TAQ2 1214 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SPDYE3A6NKU9 549 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 KIF20AO95235 890 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 CAVIN2O95810 425 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms