RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	MCM2	P49736	904 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	SEC23A	Q15436	765 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	DZIP1	Q86YF9	867 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	FAM151A	Q8WW52	585 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	JDP2	Q8WYK2	163 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ADARB2	Q9NS39	739 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ZDHHC9	Q9Y397	364 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	NEDD4	P46934	1319 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	RAD17	O75943	681 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	BAG3	O95817	575 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	CDK11B	P21127	795 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	EVX2	Q03828	476 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ARHGAP27	Q6ZUM4	889 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	CRNKL1	Q9BZJ0	848 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	DHX36	Q9H2U1	1008 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	PPP1R1B	Q9UD71	204 aa	Predicted RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	USP25	Q9UHP3	1055 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341		E7EWF7	191 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	EIF6	P56537	245 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ADCK5	Q3MIX3	580 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	NOL9	Q5SY16	702 aa	Known RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ZNF771	Q7L3S4	317 aa	Predicted RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	TSC1	Q92574	1164 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	GINM1	Q9NU53	330 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	AATF	Q9NY61	560 aa	Known RBP eCLIP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	RAI14	Q9P0K7	980 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	CTNNA3	Q9UI47	895 aa		8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ZBTB12	Q9Y330	459 aa	Predicted RBP	8.6	□□□□□ -1.03
GTF2H3-212	ENST00000543341	SHMT1	P34896	483 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	PPARA	Q07869	468 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	MICALL2	Q8IY33	904 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	TRPM4	Q8TD43	1214 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	AIDA	Q96BJ3	306 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	CCDC94	Q9BW85	323 aa	Predicted RBP	8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	NFIA	Q12857	509 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	TOB2	Q14106	344 aa	Predicted RBP	8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	SGMS1	Q86VZ5	419 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	ZFPM1	Q8IX07	1006 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	MAP3K14	Q99558	947 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	RNF181	Q9P0P0	153 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	CNOT7	Q9UIV1	285 aa	Known RBP	8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	SLC4A4	Q9Y6R1	1079 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	PASK	Q96RG2	1323 aa		8.59	□□□□□ -1.03
GTF2H3-212	ENST00000543341	GOLGA6L6	A8MZA4	724 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SMIM22	K7EJ46	135 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	FIBP	O43427	364 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	GUCY1A2	P33402	732 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	ST3GAL1	Q11201	340 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	PPP4R3B	Q5MIZ7	849 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	RUFY3	Q7L099	469 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	IGDCC4	Q8TDY8	1250 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	ZNF219	Q9P2Y4	722 aa	Predicted RBP	8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	ABCF2	Q9UG63	623 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SWAP70	Q9UH65	585 aa		8.59	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SPDYE4	A6NLX3	237 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	RPS6KB1	P23443	525 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	PLCD1	P51178	756 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	KRT32	Q14532	448 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SDR42E1	Q8WUS8	393 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	TTC12	Q9H892	705 aa	Predicted RBP	8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	PLXNB2	O15031	1838 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	RASA1	P20936	1047 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	CUL4A	Q13619	759 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	NOLC1	Q14978	699 aa	Known RBP eCLIP	8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	NBPF9	Q3BBW0	867 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	AKNAD1	Q5T1N1	836 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	RCSD1	Q6JBY9	416 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	CLEC17A	Q6ZS10	378 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	KIAA0825	Q8IV33	1275 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	PDCL2	Q8N4E4	241 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	MIGA1	Q8NAN2	632 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	TAF1D	Q9H5J8	278 aa	Predicted RBP	8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	HDAC9	Q9UKV0	1011 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	JAG2	Q9Y219	1238 aa		8.58	□□□□□ -1.04
GTF2H3-212	ENST00000543341	DDTL	A6NHG4	134 aa	Predicted RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	HMGB1	P09429	215 aa	Known RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SNHG28	P0DPA3	235 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	CPA1	P15085	419 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	KIF4B	Q2VIQ3	1234 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SPC24	Q8NBT2	197 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	MKL1	Q969V6	931 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	PRIMPOL	Q96LW4	560 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	HERC5	Q9UII4	1024 aa	Known RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SMC3	Q9UQE7	1217 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	VPS37C	A5D8V6	355 aa	Predicted RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	GOLGA6L4	A6NEF3	574 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	GADD45B	O75293	160 aa	Predicted RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	LIFR	P42702	1097 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	RRP1B	Q14684	758 aa	Known RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	SIAH1	Q8IUQ4	282 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	APOBEC3F	Q8IUX4	373 aa	Known RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	IL17RB	Q9NRM6	502 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	USP40	Q9NVE5	1235 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	ASTN2	O75129	1339 aa	Predicted RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	WDR33	Q9C0J8	1336 aa	Known RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	DDN	O94850	711 aa	Predicted RBP	8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	EPS15	P42566	896 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	CYB5R4	Q7L1T6	521 aa		8.57	□□□□□ -1.04
GTF2H3-212	ENST00000543341	FAM184A	Q8NB25	1140 aa		8.57	□□□□□ -1.04

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms