RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 TMOD4Q9NZQ9 345 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 DBNLQ9UJU6 430 aaKnown RBP14.5□□□□□ -0.09
PTPN6-219ENST00000542848 GJD2Q9UKL4 321 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 SZT2Q5T011 3432 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 USP17L10C9JJH3 530 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 MTMR2Q13614 643 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 TMED8Q6PL24 325 aaPredicted RBP14.49□□□□□ -0.09
PTPN6-219ENST00000542848 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 CERS3Q8IU89 383 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 CCDC8Q9H0W5 538 aaPredicted RBP14.49□□□□□ -0.09
PTPN6-219ENST00000542848 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 PALD1Q9ULE6 856 aa14.49□□□□□ -0.09
PTPN6-219ENST00000542848 HMGCRP04035 888 aa14.48□□□□□ -0.09
PTPN6-219ENST00000542848 HLA-DOAP06340 250 aa14.48□□□□□ -0.09
PTPN6-219ENST00000542848 CYP7A1P22680 504 aa14.48□□□□□ -0.09
PTPN6-219ENST00000542848 IRX3P78415 501 aaPredicted RBP14.48□□□□□ -0.09
PTPN6-219ENST00000542848 JAG1P78504 1218 aa14.48□□□□□ -0.09
PTPN6-219ENST00000542848 EAF2Q96CJ1 260 aaPredicted RBP14.48□□□□□ -0.09
PTPN6-219ENST00000542848 P2RX7Q99572 595 aaKnown RBP14.48□□□□□ -0.09
PTPN6-219ENST00000542848 RLBP1P12271 317 aa14.47□□□□□ -0.09
PTPN6-219ENST00000542848 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
PTPN6-219ENST00000542848 HNRNPUQ00839 825 aaKnown RBP eCLIP14.47□□□□□ -0.09
PTPN6-219ENST00000542848 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.47□□□□□ -0.09
PTPN6-219ENST00000542848 TLR7Q9NYK1 1049 aaKnown RBP14.47□□□□□ -0.09
PTPN6-219ENST00000542848 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
PTPN6-219ENST00000542848 ZBTB21Q9ULJ3 1066 aa14.47□□□□□ -0.09
PTPN6-219ENST00000542848 DDX60LQ5H9U9 1706 aaKnown RBP14.46□□□□□ -0.09
PTPN6-219ENST00000542848 NAV1Q8NEY1 1877 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 RPTORQ8N122 1335 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 EVI5O60447 810 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 IDH1O75874 414 aaKnown RBP14.46□□□□□ -0.09
PTPN6-219ENST00000542848 GDF11O95390 407 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 HERVK_113P62684 666 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 USP17L2Q6R6M4 530 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 ERC1Q8IUD2 1116 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 ANKLE1Q8NAG6 615 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 GTF3C2Q8WUA4 911 aaPredicted RBP14.46□□□□□ -0.09
PTPN6-219ENST00000542848 PRO3102Q9H379 93 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
PTPN6-219ENST00000542848 SAP30BPQ9UHR5 308 aaKnown RBP14.46□□□□□ -0.09
PTPN6-219ENST00000542848 MYH7P12883 1935 aa14.46□□□□□ -0.09
PTPN6-219ENST00000542848 ZNFX1Q9P2E3 1918 aaKnown RBP14.45□□□□□ -0.1
PTPN6-219ENST00000542848 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
PTPN6-219ENST00000542848 USP5P45974 858 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 MAP3K12Q12852 859 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
PTPN6-219ENST00000542848 TATDN1Q6P1N9 297 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 CEP85Q6P2H3 762 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 NECAB2Q7Z6G3 386 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 MAGEB6Q8N7X4 407 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 PAWRQ96IZ0 340 aaKnown RBP14.45□□□□□ -0.1
PTPN6-219ENST00000542848 NUDT12Q9BQG2 462 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 RBPJLQ9UBG7 517 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 FRMPD3Q5JV73 1810 aa14.45□□□□□ -0.1
PTPN6-219ENST00000542848 MAPK4P31152 587 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 TTC6Q86TZ1 520 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 TRMT44Q8IYL2 757 aaKnown RBP14.44□□□□□ -0.1
PTPN6-219ENST00000542848 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 EHD4Q9H223 541 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 TXNRD2Q9NNW7 524 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
PTPN6-219ENST00000542848 BAZ2AQ9UIF9 1905 aaKnown RBP14.44□□□□□ -0.1
PTPN6-219ENST00000542848 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 GH2P01242 217 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 CYP2B6P20813 491 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 ERVK-9P63128 1117 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 ERVK-24P63145 666 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 Q3C1V9 767 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 AACSQ86V21 672 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 SOCS4Q8WXH5 440 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 TRIB2Q92519 343 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 C12orf42Q96LP6 360 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 EXOC6BQ9Y2D4 811 aa14.43□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L15C9J2P7 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L13C9JLJ4 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP14P54578 494 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP17L24Q0WX57 530 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 TRIM32Q13049 653 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 PDE3AQ14432 1141 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
PTPN6-219ENST00000542848 CERKLQ49MI3 558 aaPredicted RBP14.42□□□□□ -0.1
PTPN6-219ENST00000542848 MAP3K21Q5TCX8 1036 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
PTPN6-219ENST00000542848 USP6NLQ92738 828 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 NDUFB9Q9Y6M9 179 aa14.42□□□□□ -0.1
PTPN6-219ENST00000542848 DNAH12Q6ZR08 3092 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms