RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 KIRREL1Q96J84 757 aa4.58□□□□□ -1.68
KNTC1-213ENST00000542727 TOX2Q96NM4 488 aa4.58□□□□□ -1.68
KNTC1-213ENST00000542727 MIPEPQ99797 713 aa4.58□□□□□ -1.68
KNTC1-213ENST00000542727 PRDM7Q9NQW5 492 aa4.58□□□□□ -1.68
KNTC1-213ENST00000542727 SEMA3GQ9NS98 782 aa4.58□□□□□ -1.68
KNTC1-213ENST00000542727 TTF2Q9UNY4 1162 aaKnown RBP4.58□□□□□ -1.68
KNTC1-213ENST00000542727 LMNB1P20700 586 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 RAP1GAPP47736 663 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 INPP5AQ14642 412 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 MLANAQ16655 118 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 RASIP1Q5U651 963 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 DIEXFQ68CQ4 756 aaKnown RBP4.57□□□□□ -1.68
KNTC1-213ENST00000542727 TTBK2Q6IQ55 1244 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 LETMD1Q6P1Q0 360 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 MPZL3Q6UWV2 235 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 SPOCD1Q6ZMY3 1216 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 GAL3ST3Q96A11 431 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 PLPPR2Q96GM1 343 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 HSPA12BQ96MM6 686 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 CARS2Q9HA77 564 aaKnown RBP4.57□□□□□ -1.68
KNTC1-213ENST00000542727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.57□□□□□ -1.68
KNTC1-213ENST00000542727 CAPN6Q9Y6Q1 641 aa4.57□□□□□ -1.68
KNTC1-213ENST00000542727 CST3P01034 146 aaPredicted RBP4.56□□□□□ -1.68
KNTC1-213ENST00000542727 EIF4BP23588 611 aaKnown RBP4.56□□□□□ -1.68
KNTC1-213ENST00000542727 GNA15P30679 374 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 TMEM67Q5HYA8 995 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 WIPI1Q5MNZ9 446 aaPredicted RBP4.56□□□□□ -1.68
KNTC1-213ENST00000542727 TMPRSS7Q7RTY8 843 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 ZSCAN18Q8TBC5 510 aaPredicted RBP4.56□□□□□ -1.68
KNTC1-213ENST00000542727 PIWIL2Q8TC59 973 aaKnown RBP4.56□□□□□ -1.68
KNTC1-213ENST00000542727 ALPK1Q96QP1 1244 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 FBRSQ9HAH7 460 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 ATP13A1Q9HD20 1204 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 ST14Q9Y5Y6 855 aa4.56□□□□□ -1.68
KNTC1-213ENST00000542727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.55□□□□□ -1.68
KNTC1-213ENST00000542727 LDHBP07195 334 aaKnown RBP4.55□□□□□ -1.68
KNTC1-213ENST00000542727 RLBP1P12271 317 aa4.55□□□□□ -1.68
KNTC1-213ENST00000542727 RAC2P15153 192 aa4.55□□□□□ -1.68
KNTC1-213ENST00000542727 ETV3P41162 512 aa4.55□□□□□ -1.68
KNTC1-213ENST00000542727 CDKAL1Q5VV42 579 aa4.55□□□□□ -1.68
KNTC1-213ENST00000542727 MRPL41Q8IXM3 137 aaKnown RBP4.55□□□□□ -1.68
KNTC1-213ENST00000542727 IVNS1ABPQ9Y6Y0 642 aa4.55□□□□□ -1.68
KNTC1-213ENST00000542727 PRR33A8MZF0 331 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 H3BS24 57 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 PRPF40AO75400 957 aaKnown RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 P4HBP07237 508 aaKnown RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 PTPN11Q06124 597 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 PDE4BQ07343 736 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 CCDC85BQ15834 202 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 NKG7Q16617 165 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 PRAMEF13Q5VWM6 474 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 ANKLE2Q86XL3 938 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 FBXO15Q8NCQ5 510 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 LIN37Q96GY3 246 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-213ENST00000542727 SETDB2Q96T68 719 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 WWC3Q9ULE0 1092 aa4.54□□□□□ -1.68
KNTC1-213ENST00000542727 NFIBO00712 420 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 GRK4P32298 578 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 FYB2Q5VWT5 728 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.53□□□□□ -1.68
KNTC1-213ENST00000542727 AGMOQ6ZNB7 445 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 SIAH1Q8IUQ4 282 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 MIR1-1HGQ9H1L0 117 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 TRIT1Q9H3H1 467 aaKnown RBP4.53□□□□□ -1.68
KNTC1-213ENST00000542727 C19orf73Q9NVV2 129 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 ADAM30Q9UKF2 790 aa4.53□□□□□ -1.68
KNTC1-213ENST00000542727 GFRA2O00451 464 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 CBX7O95931 251 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 PGRP06401 933 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 TNK2Q07912 1038 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 PRR23BQ6ZRT6 265 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 SYDE1Q6ZW31 735 aaPredicted RBP4.52□□□□□ -1.69
KNTC1-213ENST00000542727 CILP2Q8IUL8 1156 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 UBE2FQ969M7 185 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 TMEM59LQ9UK28 342 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 AK5Q9Y6K8 562 aa4.52□□□□□ -1.69
KNTC1-213ENST00000542727 LIG3P49916 1009 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 RPL6Q02878 288 aaKnown RBP4.51□□□□□ -1.69
KNTC1-213ENST00000542727 TSNAXIP1Q2TAA8 658 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 MCATQ8IVS2 390 aaKnown RBP4.51□□□□□ -1.69
KNTC1-213ENST00000542727 LRRC56Q8IYG6 542 aaPredicted RBP4.51□□□□□ -1.69
KNTC1-213ENST00000542727 RIN3Q8TB24 985 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 ABHD4Q8TB40 342 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 TMEM87BQ96K49 555 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 ZSWIM5Q9P217 1185 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 TJP2Q9UDY2 1190 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 RAPGEFL1Q9UHV5 662 aa4.51□□□□□ -1.69
KNTC1-213ENST00000542727 CNTNAP4Q9C0A0 1308 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 MED14OSP0DP75 135 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 SRFP11831 508 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 GLDCP23378 1020 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 CFPP27918 469 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 ST13P50502 369 aaKnown RBP4.5□□□□□ -1.69
KNTC1-213ENST00000542727 SEPT6Q14141 434 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 TTC6Q86TZ1 520 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 CCDC84Q86UT8 332 aaPredicted RBP4.5□□□□□ -1.69
KNTC1-213ENST00000542727 LILRA2Q8N149 483 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 SLC26A8Q96RN1 970 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms