RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PTMAP06454 111 aaKnown RBP9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 SMAD3P84022 425 aaKnown RBP9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 SHHQ15465 462 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 TREML2Q5T2D2 321 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 TSPYL6Q8N831 410 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 LINS1Q8NG48 757 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 STK31Q9BXU1 1019 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 PICK1Q9NRD5 415 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 PIEZO1Q92508 2521 aa9.65□□□□□ -0.86
NPIPB4-215ENST00000542133 MYH13Q9UKX3 1938 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 SYNGAP1Q96PV0 1343 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 TRIM75PA6NK02 468 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 CCDC57Q2TAC2 916 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 VPS37DQ86XT2 251 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 DNAAF4Q8WXU2 420 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 SUGT1Q9Y2Z0 365 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 DAGLAQ9Y4D2 1042 aa9.64□□□□□ -0.87
NPIPB4-215ENST00000542133 RFX7Q2KHR2 1363 aa9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 CYP2B6P20813 491 aa9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 CCND3P30281 292 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 FLIIQ13045 1269 aa9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 CDC42EP5Q6NZY7 148 aa9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 PUS3Q9BZE2 481 aaKnown RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
NPIPB4-215ENST00000542133 FRAT2O75474 233 aaPredicted RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 XRCC5P13010 732 aaKnown RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 ZKSCAN1P17029 563 aaPredicted RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 CACNB2Q08289 660 aaPredicted RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 HSP90AB4PQ58FF6 505 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 ZFPM1Q8IX07 1006 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 SOCS4Q8WXH5 440 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
NPIPB4-215ENST00000542133 RLFQ13129 1914 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 RTP1P59025 263 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 GRIN2CQ14957 1233 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 CAVIN4Q5BKX8 364 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 EXOC8Q8IYI6 725 aa9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 ATXN2LQ8WWM7 1075 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 SENP6Q9GZR1 1112 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-215ENST00000542133 MROH5Q6ZUA9 1318 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 DEKP35659 375 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 CCL14Q16627 93 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 SH3BP5LQ7L8J4 393 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 TRMT44Q8IYL2 757 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 GPATCH11Q8N954 259 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 UHRF1Q96T88 793 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ASCC2Q9H1I8 757 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 THEGQ9P2T0 379 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ARIH1Q9Y4X5 557 aaPredicted RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 LRRFIP2Q9Y608 721 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 ATAD5Q96QE3 1844 aa9.6□□□□□ -0.87
NPIPB4-215ENST00000542133 KIF16BQ96L93 1317 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 RGS3P49796 1198 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 PABPC4Q13310 644 aaKnown RBP eCLIP9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 RALBP1Q15311 655 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 VGLL2Q8N8G2 317 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 USP6NLQ92738 828 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 BADQ92934 168 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 TSR2Q969E8 191 aaKnown RBP9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 PRDM5Q9NQX1 630 aaPredicted RBP9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 ATP11BQ9Y2G3 1177 aa9.59□□□□□ -0.87
NPIPB4-215ENST00000542133 CACNA1FO60840 1977 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 GRM8O00222 908 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 DNM1LO00429 736 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 PEX10O60683 326 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 ENTPD3O75355 529 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 PRDX5P30044 214 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 RGS2P41220 211 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 HMGCS2P54868 508 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms