RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
CNOT9-208ENST00000542068 RHOXF2Q9BQY4 288 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 PHACTR2O75167 634 aa17.47■□□□□ 0.39
CNOT9-208ENST00000542068 TMEM139Q8IV31 216 aa17.47■□□□□ 0.39
CNOT9-208ENST00000542068 PPP6R2O75170 966 aa17.47■□□□□ 0.39
CNOT9-208ENST00000542068 CCT6AP40227 531 aaKnown RBP17.47■□□□□ 0.39
CNOT9-208ENST00000542068 NOSTRINQ8IVI9 506 aa17.47■□□□□ 0.39
CNOT9-208ENST00000542068 SUGCTQ9HAC7 445 aa17.47■□□□□ 0.39
CNOT9-208ENST00000542068 PES1O00541 588 aaKnown RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 TRIM28Q13263 835 aaKnown RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 SCN11AQ9UI33 1791 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 TOB1P50616 345 aaPredicted RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 KIF4BQ2VIQ3 1234 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 ZNF569Q5MCW4 686 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 FAM217BQ9NTX9 383 aaPredicted RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 RTN1Q16799 776 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 PPFIBP1Q86W92 1011 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 LY9Q9HBG7 655 aa17.46■□□□□ 0.39
CNOT9-208ENST00000542068 HOOK1Q9UJC3 728 aaKnown RBP17.46■□□□□ 0.39
CNOT9-208ENST00000542068 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 CSRNP2Q9H175 543 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 EPB41L4AQ9HCS5 686 aaPredicted RBP17.45■□□□□ 0.38
CNOT9-208ENST00000542068 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 MAPK8IP1Q9UQF2 711 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 RBL2Q08999 1139 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 SRRTQ9BXP5 876 aaKnown RBP17.45■□□□□ 0.38
CNOT9-208ENST00000542068 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
CNOT9-208ENST00000542068 CHRNDQ07001 517 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
CNOT9-208ENST00000542068 ABCC6O95255 1503 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 LOC102724428A0A0B4J2F2 783 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
CNOT9-208ENST00000542068 CDC25AP30304 524 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 SIK1P57059 783 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 UBE3CQ15386 1083 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 NTRK3Q16288 839 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 MED15Q96RN5 788 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 ABL1P00519 1130 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
CNOT9-208ENST00000542068 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 GOLGA1Q92805 767 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
CNOT9-208ENST00000542068 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 MRFAP1Q9Y605 127 aa17.44■□□□□ 0.38
CNOT9-208ENST00000542068 RAD9BQ6WBX8 426 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 ACRBPQ8NEB7 543 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.43■□□□□ 0.38
CNOT9-208ENST00000542068 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 AKR1B15C9JRZ8 316 aaPredicted RBP17.43■□□□□ 0.38
CNOT9-208ENST00000542068 KCNJ6P48051 423 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 LONRF2Q1L5Z9 754 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 HINFPQ9BQA5 517 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 BLZF1Q9H2G9 400 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 VPS18Q9P253 973 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 CHMP4BP1P59074 171 aa17.43■□□□□ 0.38
CNOT9-208ENST00000542068 STX10O60499 249 aa17.42■□□□□ 0.38
CNOT9-208ENST00000542068 CCDC175P0C221 793 aa17.42■□□□□ 0.38
CNOT9-208ENST00000542068 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
CNOT9-208ENST00000542068 GPR161Q8N6U8 529 aaKnown RBP17.42■□□□□ 0.38
CNOT9-208ENST00000542068 PDE11AQ9HCR9 933 aa17.42■□□□□ 0.38
CNOT9-208ENST00000542068 CAPN2P17655 700 aa17.42■□□□□ 0.38
CNOT9-208ENST00000542068 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
CNOT9-208ENST00000542068 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
CNOT9-208ENST00000542068 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 H3BQF6 201 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 CASP14P31944 242 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 ZNF174Q15697 407 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 EEF2KMTQ96G04 330 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 VPS16Q9H269 839 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
CNOT9-208ENST00000542068 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 KIF5CO60282 957 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 N4BP1O75113 896 aaKnown RBP17.41■□□□□ 0.38
CNOT9-208ENST00000542068 TUBB4AP04350 444 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
CNOT9-208ENST00000542068 FBXL16Q8N461 479 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 KIFC2Q96AC6 838 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 MMP1P03956 469 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 TPM1P09493 284 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
CNOT9-208ENST00000542068 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
CNOT9-208ENST00000542068 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 GDAP1L1Q96MZ0 367 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 MYH15Q9Y2K3 1946 aa17.41■□□□□ 0.38
CNOT9-208ENST00000542068 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 MAGEB6P1A0A0J9YX57 407 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 GPS2Q13227 327 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
CNOT9-208ENST00000542068 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
CNOT9-208ENST00000542068 MLKLQ8NB16 471 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms