RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 RPGRQ92834 1020 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 FAM84BQ96KN1 310 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 LLPHQ9BRT6 129 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 MXD3Q9BW11 206 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 FUT8Q9BYC5 575 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 RTEL1Q9NZ71 1219 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 PLSCR1O15162 318 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 UBASH3AP57075 661 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 GNG11P61952 73 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 PPP2R3AQ06190 1150 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 CFAP100Q494V2 611 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 MUM1L1Q5H9M0 696 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.73
THBS3-211ENST00000541990 DHX58Q96C10 678 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 CAMKK2Q96RR4 588 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 NYXQ9GZU5 481 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 SUGCTQ9HAC7 445 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 PPP2R2CQ9Y2T4 447 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 KCNJ6P48051 423 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 GPSM2P81274 684 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 EXOSC10Q01780 885 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 PNOCQ13519 176 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 KARSQ15046 597 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 MCMDC2Q4G0Z9 681 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 BPIFA3Q9BQP9 254 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 BSDC1Q9NW68 430 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 MROH5Q6ZUA9 1318 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 E7EWF7 191 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 FOXP2O15409 715 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 RNF113AO15541 343 aaKnown RBP10.46□□□□□ -0.73
THBS3-211ENST00000541990 N4BP1O75113 896 aaKnown RBP10.46□□□□□ -0.73
THBS3-211ENST00000541990 SERPINC1P01008 464 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 CDC27P30260 824 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 ARMT1Q9H993 441 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 LRP2BPQ9P2M1 347 aa10.46□□□□□ -0.73
THBS3-211ENST00000541990 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 SPTLC2O15270 562 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 PRDX5P30044 214 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 PDE4BQ07343 736 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 MTF1Q14872 753 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.74
THBS3-211ENST00000541990 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 KIFC2Q96AC6 838 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 AIFM3Q96NN9 605 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 GPR108Q9NPR9 543 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 RAI14Q9P0K7 980 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 ADAM21Q9UKJ8 722 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 MRFAP1Q9Y605 127 aa10.46□□□□□ -0.74
THBS3-211ENST00000541990 A0A1W2PQ27 194 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 A0A1W2PQ64 194 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 A0A1W2PQD8 194 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 FOXN1O15353 648 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
THBS3-211ENST00000541990 ADKP55263 362 aaKnown RBP10.45□□□□□ -0.74
THBS3-211ENST00000541990 RSRC2Q7L4I2 434 aaKnown RBP10.45□□□□□ -0.74
THBS3-211ENST00000541990 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 KCNQ5Q9NR82 932 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 FANCLQ9NW38 375 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 F8W031 263 aaPredicted RBP10.45□□□□□ -0.74
THBS3-211ENST00000541990 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 DYNLL1P63167 89 aaKnown RBP10.45□□□□□ -0.74
THBS3-211ENST00000541990 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 SLC15A2Q16348 729 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 LAMA4Q16363 1823 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
THBS3-211ENST00000541990 CYP2D7A0A087X1C5 515 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 GPAA1O43292 621 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 TOP1P11387 765 aaKnown RBP10.44□□□□□ -0.74
THBS3-211ENST00000541990 PDE6AP16499 860 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 LONRF2Q1L5Z9 754 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 ZMYM1Q5SVZ6 1142 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 PDILTQ8N807 584 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 ZNF384Q8TF68 577 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 CLIC6Q96NY7 704 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 AGXT2Q9BYV1 514 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 RASSF4Q9H2L5 321 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 MRPL44Q9H9J2 332 aaKnown RBP10.44□□□□□ -0.74
THBS3-211ENST00000541990 POLLQ9UGP5 575 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 UFL1O94874 794 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 BMP6P22004 513 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 CASQ1P31415 396 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 MCM6Q14566 821 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 SRLQ86TD4 932 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 FOXP4Q8IVH2 680 aaPredicted RBP10.44□□□□□ -0.74
THBS3-211ENST00000541990 PDE11AQ9HCR9 933 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 ARFGAP3Q9NP61 516 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 NRDCO43847 1150 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
THBS3-211ENST00000541990 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms