RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 TAOK2Q9UL54 1235 aa18.21■□□□□ 0.51
ITM2C-208ENST00000541852 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
ITM2C-208ENST00000541852 HMGCRP04035 888 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 MTMR2Q13614 643 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 TRMT44Q8IYL2 757 aaKnown RBP18.2■□□□□ 0.5
ITM2C-208ENST00000541852 ANKLE1Q8NAG6 615 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
ITM2C-208ENST00000541852 PIH1D3Q9NQM4 214 aaKnown RBP18.2■□□□□ 0.5
ITM2C-208ENST00000541852 XRCC5P13010 732 aaKnown RBP18.19■□□□□ 0.5
ITM2C-208ENST00000541852 USP5P45974 858 aa18.19■□□□□ 0.5
ITM2C-208ENST00000541852 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
ITM2C-208ENST00000541852 ADGRA1Q86SQ6 560 aa18.19■□□□□ 0.5
ITM2C-208ENST00000541852 P2RX7Q99572 595 aaKnown RBP18.19■□□□□ 0.5
ITM2C-208ENST00000541852 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
ITM2C-208ENST00000541852 HMX1Q9NP08 348 aaPredicted RBP18.19■□□□□ 0.5
ITM2C-208ENST00000541852 RPTORQ8N122 1335 aa18.19■□□□□ 0.5
ITM2C-208ENST00000541852 ATAD5Q96QE3 1844 aa18.19■□□□□ 0.5
ITM2C-208ENST00000541852 LOC285556D6RIA3 1793 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 MAPK4P31152 587 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 TATDN1Q6P1N9 297 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 CEP85Q6P2H3 762 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
ITM2C-208ENST00000541852 SOCS4Q8WXH5 440 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 EHD4Q9H223 541 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
ITM2C-208ENST00000541852 ZBTB21Q9ULJ3 1066 aa18.18■□□□□ 0.5
ITM2C-208ENST00000541852 EVI5O60447 810 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 RLBP1P12271 317 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 USP14P54578 494 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 HERVK_113P62684 666 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
ITM2C-208ENST00000541852 MAGEB6Q8N7X4 407 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.17■□□□□ 0.5
ITM2C-208ENST00000541852 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
ITM2C-208ENST00000541852 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
ITM2C-208ENST00000541852 PDE3AQ14432 1141 aa18.16■□□□□ 0.5
ITM2C-208ENST00000541852 CHRDL2Q6WN34 429 aa18.16■□□□□ 0.5
ITM2C-208ENST00000541852 AACSQ86V21 672 aa18.16■□□□□ 0.5
ITM2C-208ENST00000541852 RPAP2Q8IXW5 612 aaPredicted RBP18.16■□□□□ 0.5
ITM2C-208ENST00000541852 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
ITM2C-208ENST00000541852 MAST2Q6P0Q8 1798 aa18.16■□□□□ 0.5
ITM2C-208ENST00000541852 A0A1W2PPC1 479 aa18.15■□□□□ 0.5
ITM2C-208ENST00000541852 HMMRO75330 724 aa18.15■□□□□ 0.5
ITM2C-208ENST00000541852 GLRX3O76003 335 aaKnown RBP18.15■□□□□ 0.5
ITM2C-208ENST00000541852 CERKLQ49MI3 558 aaPredicted RBP18.15■□□□□ 0.5
ITM2C-208ENST00000541852 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
ITM2C-208ENST00000541852 FOCADQ5VW36 1801 aa18.14■□□□□ 0.5
ITM2C-208ENST00000541852 USP17L15C9J2P7 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L13C9JLJ4 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L11C9JVI0 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L18D6R9N7 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L22D6RA61 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L17D6RBQ6 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L19D6RCP7 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L20D6RJB6 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 GDF11O95390 407 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 GH2P01242 217 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 ERVK-9P63128 1117 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 ERVK-24P63145 666 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 CCNA1P78396 465 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 JAG1P78504 1218 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 USP17L24Q0WX57 530 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 MIER1Q8N108 512 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
ITM2C-208ENST00000541852 KIF1BPQ96EK5 621 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 PAWRQ96IZ0 340 aaKnown RBP18.14■□□□□ 0.49
ITM2C-208ENST00000541852 C12orf42Q96LP6 360 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 EMILIN3Q9NT22 766 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
ITM2C-208ENST00000541852 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 TRIOBPQ9H2D6 2365 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
ITM2C-208ENST00000541852 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
ITM2C-208ENST00000541852 MIGA1Q8NAN2 632 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 RHPN1Q8TCX5 695 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 NBPF3Q9H094 633 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 KIAA1683Q9H0B3 1180 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 RBM27Q9P2N5 1060 aaKnown RBP18.13■□□□□ 0.49
ITM2C-208ENST00000541852 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 CDK5RAP2Q96SN8 1893 aa18.13■□□□□ 0.49
ITM2C-208ENST00000541852 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
ITM2C-208ENST00000541852 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
ITM2C-208ENST00000541852 CYP2B6P20813 491 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 RGS2P41220 211 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 ABCB5Q2M3G0 1257 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 PLEKHH3Q7Z736 793 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 FEZ1Q99689 392 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 CRNKL1Q9BZJ0 848 aaKnown RBP18.12■□□□□ 0.49
ITM2C-208ENST00000541852 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
ITM2C-208ENST00000541852 TXNRD2Q9NNW7 524 aa18.12■□□□□ 0.49
ITM2C-208ENST00000541852 MYH1P12882 1939 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms