RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 NEK3P51956 506 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 GEMIN4P57678 1058 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ZNF280AP59817 542 aaPredicted RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 FAM160A1Q05DH4 1040 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 CAMK2GQ13555 558 aaPredicted RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ESCO1Q5FWF5 840 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 ZKSCAN2Q63HK3 967 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 IL31Q6EBC2 164 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 GLIS3Q8NEA6 775 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 PPHLN1Q8NEY8 458 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ERP27Q96DN0 273 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 ELAC2Q9BQ52 826 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ANP32EQ9BTT0 268 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 TARS2Q9BW92 718 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 PUS7LQ9H0K6 701 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ESF1Q9H501 851 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 KLK14Q9P0G3 267 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 FBXO2Q9UK22 296 aaPredicted RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 ZNRF3Q9ULT6 936 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
DDB1-219ENST00000541513 KANK1Q14678 1352 aa6.77□□□□□ -1.33
DDB1-219ENST00000541513 SERTM1A2A2V5 107 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 ERVH48-1M5A8F1 160 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 PLD2O14939 933 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 GNRH1P01148 92 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 IMPDH2P12268 514 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 DDIT3P35638 169 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 HALP42357 657 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 MLECQ14165 292 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 PPP2R5EQ16537 467 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 PTCRAQ6ISU1 281 aaPredicted RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 GGT6Q6P531 493 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 NYAP1Q6ZVC0 841 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 STRA8Q7Z7C7 330 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 ZBTB38Q8NAP3 1195 aaPredicted RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 MTMR8Q96EF0 704 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 NGLY1Q96IV0 654 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 TTC14Q96N46 770 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 SPATA9Q9BWV2 254 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 CSRNP2Q9H175 543 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 NCOA5Q9HCD5 579 aaKnown RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 ATG3Q9NT62 314 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 CLIC5Q9NZA1 410 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 PUF60Q9UHX1 559 aaKnown RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 NOL7Q9UMY1 257 aaKnown RBP6.76□□□□□ -1.33
DDB1-219ENST00000541513 TRAK1Q9UPV9 953 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 PTPRMP28827 1452 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 ARHGAP31Q2M1Z3 1444 aa6.76□□□□□ -1.33
DDB1-219ENST00000541513 PZPP20742 1482 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 BICDL2A1A5D9 508 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 VSTM5A8MXK1 200 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 GPR39O43194 453 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 SERPINB3P29508 390 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 GBX1Q14549 363 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 TTLL5Q6EMB2 1281 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 KANK3Q6NY19 840 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 DDX46Q7L014 1031 aaKnown RBP6.75□□□□□ -1.33
DDB1-219ENST00000541513 NLRP8Q86W28 1048 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 LSRQ86X29 649 aaPredicted RBP6.75□□□□□ -1.33
DDB1-219ENST00000541513 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
DDB1-219ENST00000541513 NBPF15Q8N660 670 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 ZNF511Q8NB15 262 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
DDB1-219ENST00000541513 GJA10Q969M2 543 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 FERD3LQ96RJ6 166 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 PPP4R2Q9NY27 417 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 USP3Q9Y6I4 520 aa6.75□□□□□ -1.33
DDB1-219ENST00000541513 E9PCH4 1651 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 PREX1Q8TCU6 1659 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 RPRD2Q5VT52 1461 aaKnown RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 NUP155O75694 1391 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 RAB3GAP2Q9H2M9 1393 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 PHACTR2O75167 634 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 NPTXRO95502 500 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 ZSCAN20P17040 1043 aaPredicted RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 PPM1FP49593 454 aaPredicted RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 ZNF165P49910 485 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 ITKQ08881 620 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 AGERQ15109 404 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 GLIPR1L2Q4G1C9 344 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 SEZ6Q53EL9 994 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 KIAA0319Q5VV43 1072 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms