RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 XAGE2Q96GT9 111 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 PAGR1Q9BTK6 254 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
COPA-205ENST00000541366 NDUFB9Q9Y6M9 179 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 MUC3AQ02505 3323 aa14.63□□□□□ -0.07
COPA-205ENST00000541366 A0A1B0GUL7 405 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 HOXA7P31268 230 aaPredicted RBP14.62□□□□□ -0.07
COPA-205ENST00000541366 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
COPA-205ENST00000541366 BACE1P56817 501 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 MORN1Q5T089 497 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 TEX11Q8IYF3 940 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 DNAJC18Q9H819 358 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 HMG20BQ9P0W2 317 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 FRMPD3Q5JV73 1810 aa14.62□□□□□ -0.07
COPA-205ENST00000541366 ABCB7O75027 752 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 GDF11O95390 407 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 MAPK4P31152 587 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 ERVK-9P63128 1117 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 ERVK-24P63145 666 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 TFCP2Q12800 502 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
COPA-205ENST00000541366 CDX2Q99626 313 aaPredicted RBP14.61□□□□□ -0.07
COPA-205ENST00000541366 LBHD1Q9BQE6 289 aaPredicted RBP14.61□□□□□ -0.07
COPA-205ENST00000541366 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 TBC1D2Q9BYX2 928 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 TMOD4Q9NZQ9 345 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 FLRT1Q9NZU1 646 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
COPA-205ENST00000541366 ZNF521Q96K83 1311 aa14.61□□□□□ -0.07
COPA-205ENST00000541366 MAST2Q6P0Q8 1798 aa14.6□□□□□ -0.07
COPA-205ENST00000541366 RGS2P41220 211 aa14.6□□□□□ -0.07
COPA-205ENST00000541366 ZNF697Q5TEC3 545 aa14.6□□□□□ -0.07
COPA-205ENST00000541366 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
COPA-205ENST00000541366 SHHQ15465 462 aa14.59□□□□□ -0.07
COPA-205ENST00000541366 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
COPA-205ENST00000541366 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
COPA-205ENST00000541366 TRMT44Q8IYL2 757 aaKnown RBP14.59□□□□□ -0.07
COPA-205ENST00000541366 MAFAQ8NHW3 353 aaPredicted RBP14.59□□□□□ -0.07
COPA-205ENST00000541366 NEUROD6Q96NK8 337 aa14.59□□□□□ -0.07
COPA-205ENST00000541366 APBA2Q99767 749 aa14.59□□□□□ -0.07
COPA-205ENST00000541366 EMILIN3Q9NT22 766 aa14.59□□□□□ -0.07
COPA-205ENST00000541366 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
COPA-205ENST00000541366 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 CNMDO75829 334 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 LDHCP07864 332 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 ASNSP08243 561 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 CNGA1P29973 690 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 RTP1P59025 263 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 MVPQ14764 893 aaKnown RBP14.58□□□□□ -0.08
COPA-205ENST00000541366 MAPKAPK5Q8IW41 473 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 MYLIPQ8WY64 445 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 MEIS3Q99687 375 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 SEMA6BQ9H3T3 888 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
COPA-205ENST00000541366 LTBP2Q14767 1821 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 C19orf81C9J6K1 198 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 GSTO1P78417 241 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 ZYXQ15942 572 aaKnown RBP14.57□□□□□ -0.08
COPA-205ENST00000541366 WDR78Q5VTH9 848 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 TRPV1Q8NER1 839 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 TGFBRAP1Q8WUH2 860 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
COPA-205ENST00000541366 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
COPA-205ENST00000541366 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
COPA-205ENST00000541366 PRDM6Q9NQX0 595 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 AATFQ9NY61 560 aaKnown RBP eCLIP14.57□□□□□ -0.08
COPA-205ENST00000541366 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 ZBTB21Q9ULJ3 1066 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 ATP11BQ9Y2G3 1177 aa14.57□□□□□ -0.08
COPA-205ENST00000541366 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
COPA-205ENST00000541366 CYP2C19P33261 490 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 MCAMP43121 646 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
COPA-205ENST00000541366 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
COPA-205ENST00000541366 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
COPA-205ENST00000541366 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
COPA-205ENST00000541366 CDK5RAP2Q96SN8 1893 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 GORABQ5T7V8 394 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 CRACR2BQ8N4Y2 399 aaPredicted RBP14.55□□□□□ -0.08
COPA-205ENST00000541366 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 LRP2BPQ9P2M1 347 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 PRKAG2Q9UGJ0 569 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
COPA-205ENST00000541366 AKAP2Q9Y2D5 859 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 FLT1P17948 1338 aa14.55□□□□□ -0.08
COPA-205ENST00000541366 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 PTPREP23469 700 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 ARID4AP29374 1257 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms