RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SLC26A6Q9BXS9 759 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.98□□□□□ -0.657e-7■□□□□ 9.6
CNOT4-212ENST00000541284 A0A087X0B3 334 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 UBASH3AP57075 661 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 FUT2Q10981 343 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
CNOT4-212ENST00000541284 PCDHB6Q9Y5E3 794 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 SNED1Q8TER0 1413 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 WNT7AO00755 349 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 IGSF3O75054 1194 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 SEC23AQ15436 765 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
CNOT4-212ENST00000541284 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 MYO1BO43795 1136 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 NR5A1Q13285 461 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 EARS2Q5JPH6 523 aaKnown RBP10.97□□□□□ -0.65
CNOT4-212ENST00000541284 DIS3L2Q8IYB7 885 aaKnown RBP10.97□□□□□ -0.65
CNOT4-212ENST00000541284 CRACR2BQ8N4Y2 399 aaPredicted RBP10.97□□□□□ -0.65
CNOT4-212ENST00000541284 JMYQ8N9B5 988 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 FHOD1Q9Y613 1164 aa10.97□□□□□ -0.65
CNOT4-212ENST00000541284 APPP05067 770 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 SUSD4Q5VX71 490 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 AMIGO3Q86WK7 504 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 CMTR1Q8N1G2 835 aaKnown RBP10.96□□□□□ -0.65
CNOT4-212ENST00000541284 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.65
CNOT4-212ENST00000541284 ST7Q9NRC1 585 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 IFIT3O14879 490 aaKnown RBP10.96□□□□□ -0.65
CNOT4-212ENST00000541284 ZRANB2O95218 330 aaKnown RBP eCLIP10.96□□□□□ -0.657e-6■■■■■ 37.3
CNOT4-212ENST00000541284 GABPB1Q06547 395 aaPredicted RBP10.96□□□□□ -0.65
CNOT4-212ENST00000541284 SSRP1Q08945 709 aaKnown RBP10.96□□□□□ -0.65
CNOT4-212ENST00000541284 NPY5RQ15761 445 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 PKN1Q16512 942 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 ZKSCAN3Q9BRR0 538 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.65
CNOT4-212ENST00000541284 TADA3O75528 432 aa10.96□□□□□ -0.66
CNOT4-212ENST00000541284 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.66
CNOT4-212ENST00000541284 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.66
CNOT4-212ENST00000541284 TBC1D2BQ9UPU7 963 aa10.96□□□□□ -0.66
CNOT4-212ENST00000541284 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.66
CNOT4-212ENST00000541284 POSTNQ15063 836 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 RC3H1Q5TC82 1133 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 CNNM3Q8NE01 707 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 KIF20AO95235 890 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 TUBB4AP04350 444 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 CLCN6P51797 869 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 DHX8Q14562 1220 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 ZNF384Q8TF68 577 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 MTA3Q9BTC8 594 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 NAPBQ9H115 298 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 SRPRBQ9Y5M8 271 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 PBX1P40424 430 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 BCAMP50895 628 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 RCAN1P53805 252 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 TPM4P67936 248 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 DZIP3Q86Y13 1208 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 ENOX1Q8TC92 643 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 UTP14AQ9BVJ6 771 aaKnown RBP10.95□□□□□ -0.66
CNOT4-212ENST00000541284 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
CNOT4-212ENST00000541284 PDS5AQ29RF7 1337 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 WTIPA6NIX2 430 aaPredicted RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 CRKLP46109 303 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 WDR24Q96S15 920 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 POLR2DO15514 142 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 NR1I3Q14994 352 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 TERF2Q15554 542 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 ZRSR1Q15695 479 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 RTN1Q16799 776 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 CPLX2Q6PUV4 134 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
CNOT4-212ENST00000541284 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 KRT23Q9C075 422 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 DNAI1Q9UI46 699 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
CNOT4-212ENST00000541284 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 SERPINC1P01008 464 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 SIK1P57059 783 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 CUL4BQ13620 913 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 NOM1Q5C9Z4 860 aaKnown RBP10.93□□□□□ -0.66
CNOT4-212ENST00000541284 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 KRT222Q8N1A0 295 aa10.93□□□□□ -0.66
CNOT4-212ENST00000541284 CSRNP2Q9H175 543 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms